Lates calcarifer (barramundi perch): 108882030
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Entry
108882030 CDS
T04895
Symbol
nectin4a
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108882030 (nectin4a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108882030 (nectin4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108882030 (nectin4a)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Nectin family
108882030 (nectin4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
FAM176
TMEM154
DUF7237
EphA2_TM
LST1
EzrA
LapA_dom
DUF6377
Motif
Other DBs
NCBI-GeneID:
108882030
NCBI-ProteinID:
XP_018529767
UniProt:
A0A4W6D8K9
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All DBs
Position
LG14:complement(4040802..4060976)
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AA seq
621 aa
AA seq
DB search
MTSLLSRLCLCLFVLRIFVTVIQGEFVDLPPNGSMRSLAEEETVLPCHYQPSGNDVVVQV
TWYKEKSDGTKEQIILAHHINGQTAFGPWSRRVRFRSSEPTVDSSLVIMSTEVSDEGKYI
CHISTFPSGNFENEMSLIVWTIPISSLEPVILVEGQSYRQAASCRSIARPSPRISWDTDL
NGQSINRSSDNGAVSSHYSLHPLRSMNGKKLDCLVWHVTSPTPRRLRNRLVVHFPPHVEV
SSNNKDWSVGLENAALSCVSGGNPKPQSFTWIRKDSELPEGVIPHPNGTLIFGRPLSLSD
RGIYKCVAKNEVGEANAEMEIVVTDSSERQIFPENMLMLIVGGVAGGLLILMLIIVITVT
CHHKRKNTKLEKELTEKKEEISTLSRQASFRRVNSISTDTRGATEENIPLRVEGTLRTSL
SSLGEQAHCRDSRSTISGGRGGGGGGGGAFDYLGRPVLHNNSRRGRDRILDRDEENRLRV
ETYVRNSSMSLQETRFHPPLTPSPFPTIQSTEIVRQLNGSVIIPTDGGSRPGSVTKNHQH
PPMSCTYPPVTDDEDEVDEGLGGPASQEHPDDQDSETNSSQVSEAHSTRYQQTNGMFRPK
PRPSPSGISPHASLIHKAQIV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctgctgagcagactctgcctgtgtctctttgtcctccggatctttgttaca
gtgatacaaggagagtttgtggatctccctccaaatggttccatgcgctccttggcagag
gaggagactgtcctgccctgtcattaccagccaagtggcaacgatgtggtggtgcaggtg
acttggtataaggagaaatctgatggcaccaaggaacagatcatccttgcacaccatatt
aatggacagacagcattcgggccatggtctcgacgcgtgcgctttagaagcagcgaaccc
acagtggactcgtcactggtcatcatgagcacagaggtctctgatgaggggaagtatatc
tgccacatcagcaccttcccctctggcaactttgaaaatgagatgtcactcatcgtgtgg
accatccctatctcctccctggagcctgtgattctggtggagggccagtcctaccgacag
gctgcttcctgtcgatccatagcccgcccatctccccgcatctcctgggacaccgacctg
aatggccagtccatcaaccgctcttccgacaacggggcggtctcctcgcactactccctg
caccccctgaggagcatgaatggcaagaagctggactgtctggtgtggcatgtgacctca
ccgaccccccgcaggctccgcaaccgcctggtagtgcacttccctccacatgtagaggtg
tctagcaacaataaagactggtccgtgggtctggagaatgctgccttgagttgcgtgagt
ggaggaaaccccaaaccacagagtttcacctggatcaggaaggatagtgagttgccagag
ggtgtgatcccccaccctaatggaacactaatttttgggcgacccctgagcctgtcagac
agaggcatctacaagtgcgtggcaaagaatgaagtaggagaagcaaacgcagagatggag
attgttgtgacagattcttctgagaggcagatattccctgaaaacatgcttatgctcatc
gtggggggcgtggcaggcgggttgctaatcttgatgcttatcattgtcatcactgtcaca
tgccaccacaaacgcaagaacacgaaactggagaaggagctgacagagaagaaggaggaa
ataagcactctctccaggcaagcttctttcaggagagtgaactctatcagcacagatacc
agaggagcgacagaagaaaacatccctctgagggtggagggaaccctgaggaccagcctg
tcttccctcggggaacaggctcactgccgtgacagcagatctactatctcagggggacgg
ggaggaggaggaggaggagggggtgcatttgactacctgggtagaccagtcctacacaac
aactcgcggaggggtagagacaggattctggatagagatgaggagaatcgactccgagtg
gagacatatgtaagaaacagcagtatgtctttgcaggaaactcgtttccaccctcctctc
acgccatcaccctttcccaccatccagtccactgagattgtgagacagctaaatggcagc
gtcattatcccaacagatgggggttcacggccaggaagtgtcaccaaaaatcaccagcac
ccgcctatgagctgcacctacccaccagtaacagatgatgaggatgaggtggatgaaggt
ttggggggtcctgccagccaggagcatcccgacgaccaggacagtgagaccaacagctcc
caggtgtctgaggctcacagtacacgctatcagcagactaatggcatgtttagacccaaa
cccagaccaagcccctctgggatcagtccccatgcctccctcatccacaaggctcagata
gtttag
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