KEGG   Lates calcarifer (barramundi perch): 108882204
Entry
108882204         CDS       T04895                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04514  Cell adhesion molecules
lcf04672  Intestinal immune network for IgA production
lcf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108882204
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108882204
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    108882204
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108882204
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108882204
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108882204
  Exosomal proteins of epithelial cells
   108882204
  Exosomal proteins of breast milk
   108882204
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 108882204
NCBI-ProteinID: XP_018530080
UniProt: A0AAJ7PKV4
LinkDB
Position
Unknown
AA seq 248 aa
MASSFLSFSLLFIAVCSADGFREYAVDRCVFNSSELSGIEYIYSHYYNKLEYARFSSSVG
KYVGYTEFGVKNAERWNSGPELAQRKNEKERYCLHNIGIDYQSALSKSVKPSIRLHSTTP
PAGKHPAMLVCSVYDFYPKQIRVSWTRDGQEVTSDVTSTEELADADWYYQVHSHLEYTPR
SGEKISCVVEHASLKEPLVTDWDPSMPESERNKIAIGASGLILGLILSLAGFIYYRRKAR
GRILVPTN
NT seq 747 nt   +upstreamnt  +downstreamnt
atggcttcatcctttctcagcttctccctcctcttcatcgctgtctgctcagcagatgga
tttagggagtatgcagtggaccgttgtgtgtttaactcctctgagctgagcggcatcgag
tacatctactctcactattacaacaaactggagtacgccaggttcagcagcagtgtgggg
aagtatgttggatacactgagtttggagtgaagaacgcagaacgatggaacagtggtcca
gagctggctcagaggaagaatgagaaggagagatactgccttcacaacattgggattgac
taccagtctgctctgtctaagtcagtcaaaccctccatcagacttcactccacgacgccc
cctgctggtaaacatcctgccatgttggtctgcagcgtctacgacttctaccccaaacag
atcagagtgagctggaccagagacggacaggaagtcacctctgatgtcacttccactgag
gagctggcagatgctgactggtactaccaggtccactctcacctggagtacactcccagg
tctggagagaagatctcctgtgtggtggagcacgccagcctgaaagaacctctggttact
gactgggatccgtccatgcctgagtcagagaggaacaagatcgccatcggagcctcagga
ctgatcctgggtctgatcttatctttggctggattcatctactacaggaggaaggcccga
ggacggatcctggttcccactaactga

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