Lates calcarifer (barramundi perch): 108882296
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Entry
108882296 CDS
T04895
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108882296 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108882296 (psen2)
Peptidases and inhibitors [BR:
lcf01002
]
Aspartic peptidases
Family A22: presenilin family
108882296 (psen2)
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GFIT
Motif
Pfam:
Presenilin
DUF3377
Motif
Other DBs
NCBI-GeneID:
108882296
NCBI-ProteinID:
XP_018530253
UniProt:
A0A4W6E5H8
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Position
LG5:complement(374823..380325)
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AA seq
431 aa
AA seq
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MNASDSDEDFYNERTALVPSENPVVPSYRPDSDLTPENCTPTKVPGVSRRAGPAAPDGGG
GSDQEVDADDEELTLKYGAKHVIMLFIPVTLCMVVVVATIKSVSFYTEKTDQQLIYTPFT
ENTPSVGRRLLNSVLNTIIMISVIVVMTIFLVILYKYRCYKFIHGWLILSSLMLLFWFSF
MYLGEVFKTYNLAVDYPTVGVIIWNFGAVGMICIHWKGPLQLQQAYLILISALMALVFIK
YLPEWSAWVILGAISVYDLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMVWTVGMA
SPMDAQRSEHGSDEEAEQSGGRGEPERRQPRTFPEDDVEEDRGVKLGLGDFIFYSVLVGK
AAATGGDCNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFSTDFLVQPF
MDNLAAHQFYI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctcagacagtgatgaggacttctataacgagaggacggcgttggtcccgtca
gagaatccagtggtgccatcctacagaccagactcagacctcacccccgaaaattgcaca
ccaaccaaagtgcctggggtgagcaggagggcgggtccagctgctccggatggtggcggc
ggctcggatcaggaggtggacgcagacgatgaggagctgactctgaagtacggagcgaag
cacgtcatcatgctgttcatccctgtcaccctctgcatggtggtggtggttgccaccatc
aagtccgtcagcttctacaccgagaagaccgaccagcagctgatctacacgccgttcaca
gagaacaccccgtctgtcggccgccggctcctcaactccgtcctcaacaccatcatcatg
atcagcgtcatcgtggtcatgaccatcttcttggtcatcctctacaagtatcgctgctac
aagttcatccacggctggctcatcctgtcctccctcatgctgctcttctggttcagcttc
atgtacctcggcgaagtgtttaagacttacaacctggccgtggactacccgacagtgggg
gtgatcatctggaacttcggggcggtggggatgatctgtatccactggaagggtccgctc
cagctgcagcaggcctacctgatcctgatcagcgccctcatggccctcgtcttcatcaaa
tacctgcccgaatggtcggcatgggtcatcctgggagccatctccgtctacgacctggtg
gccgtcctgtctcctaaaggtcccctcaggatgttggtggagacggctcaggagcgcaac
gagcccatcttccccgccctcatctactcctctgccatggtgtggaccgtggggatggcg
agcccgatggacgctcagcgctctgaacacggatcagacgaggaggcggagcagagcggc
gggcggggggagcctgagcgcagacagccgcggacgttccctgaggacgacgtggaggag
gacaggggggtgaagctcggcctcggtgatttcatcttctacagcgtcctggttggaaaa
gccgcagcgaccggcggagactgcaacacgacactcgcctgcttcgtcgccatcctcatc
ggtctgtgtctgactctgctgctgttggccatctttaagaaagctctgccagctctgccc
atctccatcaccttcggcctcgtcttctacttctccacagacttcctggtccagcccttc
atggacaacctggcagctcatcagttttatatctga
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