Lates calcarifer (barramundi perch): 108882377
Help
Entry
108882377 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: integrator complex subunit 4
KO
K13141
integrator complex subunit 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108882377
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108882377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
HEAT_2
PDS5
Cnd1
Adaptin_N
SCD
Vac14_Fab1_bd
CEP104-like_TOG
Cnd3
API5
Motif
Other DBs
NCBI-GeneID:
108882377
NCBI-ProteinID:
XP_050921305
UniProt:
A0AAJ8AWB2
LinkDB
All DBs
Position
LG21:complement(2231267..2239360)
Genome browser
AA seq
978 aa
AA seq
DB search
MAAHLKKRVYEEFSKVVQIPHEEAPAKKLRLSKPSKSAALHIDLCKATNSTDALQYLLQF
ARKPVEAESVEGVVRILLEHYYKETDNSVRLKIASLLGLLSKTQGFSPDCIVDDAINTLS
NEKSHQVLAQLLDTLLVIGTQLPESPAVRQRLIEMACKHLSDTYFGVRIKCLQLLGCLGM
VDSPLNKDSRGTGNIDRXVRDVQSIISDYFGDQDPRVRTAAIKAMLQLHERGMKIHQIIY
DQACRLLSDDYEQVRSAAVQMVWVLSQLYPESIVPIPSSNEEIRLVDDAFGKISHMVSDG
SWMVRVQAAKTLGSMLQVSPHFLEQTLDKKLMSDLRRKRTAHERAKELFTSGEFSSGRKW
ADDAPKEKLDTNTVNLIASGACGAFVHGLEDEMFEVRIAAVEALCKLARSSPSFAEKCLD
FLVDMFNDEIEEVRLQSIHVLREISMHITLREDQLDTVLAVLEDSSRDIREALHELLCYT
NVSTKECIQLALLELLKNLNKYPTDRNSVWKCLKFVGSRHPTLVLPLVSELLSTHPYFDT
PEPDMDDPAYIAVLVLVFNAAKSCPTMPALFSDHTFRHYAYLRDSLSHLVPPLRLPGRKQ
VYGLDSVDSGSGSGSVESAQLFLQQSLNRVSTIQNLEAPGAQDLLDFTIRDLQRLGELQT
ELAGAADFCATYLRCQLLLMKALQEKLWNMAVPLCLKQNVTATAAAQQILEETYKLEFLY
SGLENRHVATIHHVRLQAKALQLVLSARTRQGLDPLISSCEKFLQDVESFQRLFLTELPH
LQDSFVDKLLELMPRLSSCKPVELVKILQTTLRQSGLLQLKLPEQIHRATATIIEPTGES
DNPLRFTSGLVVALDIDATLEHVQDPQNSVKVQVLYPDGQSHVIHPKPGDFRKPGPDRHR
LITQVYLSHTAWTEPSQIEVRLLLAYSSSSTSLSVLHSKQQGWSESIDSIPPPEAAVEGT
IRFSKPVKVYIMPKPARR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacatctgaaaaagcgagtttatgaggagttttccaaagttgtacagattccc
catgaagaagctccggccaagaagctgcgtctgtccaaacccagtaaatctgcggctctg
cacatcgacctctgtaaggccaccaactccactgatgctctgcagtacctgctgcagttc
gcacgcaaacctgtggaggcggagagcgtggagggtgtagtcaggatcctgctggagcac
tactacaaggagacagataactcagtgaggctgaagatcgcctctctgctgggtctgctg
tccaaaacacagggtttcagccccgactgcatcgttgacgacgccattaacacactcagc
aatgagaagtcccatcaggtcctcgctcagctgctggacactctgctggtcattggtaca
cagctaccagagagccctgcagtcagacagaggctcatagagatggcctgcaagcacctg
tcagacacatacttcggggtgaggatcaagtgtctgcaactcctgggatgtctcggcatg
gtggacagtcctctgaacaaagacagtcgagggactgggaacatcgataggtgagtgagg
gacgtccagagtatcatcagcgactactttggagaccaggaccccagagtgcgcactgca
gccatcaaagccatgctgcagctgcacgagagaggaatgaagattcatcagatcatttat
gaccaggcctgcaggctgctgtcggatgattacgagcaggtccgctctgcagcggtgcag
atggtctgggtgctgagtcagctgtacccagagagcattgtgcccatcccgtcgtccaat
gaagagatccgactggtcgacgacgcctttgggaagatcagtcacatggtcagcgatgga
tcctggatggtccgggtgcaggccgccaaaactctgggttcgatgctgcaggtcagtcct
cacttcctggagcaaactttggataagaagctgatgtccgatctcaggaggaagcgtacg
gcccacgaacgagccaaggagctcttcacctccggagagttctcctccggcaggaagtgg
gccgacgacgcccccaaggagaaactggacaccaacacggtcaacctcatcgcctcgggg
gcctgtggcgcatttgttcatggcctagaggacgagatgtttgaggtccgcatcgcggcg
gtggaggcgttgtgtaagctggcccggtcgtctcccagcttcgccgagaagtgtctggac
ttcctggtcgacatgttcaacgacgagatagaggaagtgaggctgcagtccatccacgtc
ctgagagaaatctctatgcacatcacactcagagaggaccagctggacacggtgctcgct
gtgttggaggactcgtctcgtgacatcagagaagctctccatgaattactctgttacacc
aatgtctccactaaagagtgtatccagctggctctgctggagctgctgaagaacctcaac
aagtatcccaccgaccgcaactctgtctggaagtgtctgaagtttgtgggttctcgtcat
ccgacactggtgctgccgctggtttctgaactcctcagcacacacccatatttcgacaca
ccagagcctgacatggacgacccggcctacattgcggtgctggtgttggtgttcaacgct
gccaagtcgtgccccaccatgccggctctgttctccgatcacaccttcagacactacgcc
tacctgagggacagtctgtcacacctcgtaccaccgctgagattgccaggcaggaagcag
gtttacggtctggactcggtggactcgggcagtggttcaggttctgtggaatcggctcag
ctcttccttcagcagagtctcaacagggtcagcaccatccagaacctggaagcacccgga
gctcaggacctgctggacttcactatacgagacctgcagcggctcggtgagctgcagacc
gaactcgccggagctgcagatttctgtgctacgtacctgcgctgccagctgctgctcatg
aaggctctgcaggagaagctgtggaacatggccgtccctctctgcctcaaacaaaacgtc
acggccacggcggcagctcagcagatcttagaggaaacctacaagctggagtttctgtac
agcggtctggagaacagacatgtggccaccatacatcacgttcgcctccaggccaaagcc
ctgcagctcgtcctgtctgctcgcaccagacaagggttggatcctctcatcagcagctgt
gagaagtttttgcaggatgttgaatcttttcagaggctgtttctgacagagctgccccac
ctccaggacagttttgtggacaagcttttggagctcatgccccggctgtcgtcctgtaaa
ccagtggagctggtgaagatcctccagacgaccctcagacagagcggcctgctgcagctc
aaactgcctgagcagatccatcgagcgacagccaccatcatagagccgactggggagtct
gataatcccctgaggtttacatctggcctggtggtggcgctagacatcgatgcaacgctg
gagcacgtccaggatcctcagaacagcgtcaaagtgcaggttctgtatccagacggccag
agtcacgtgatccatcctaaacctggagacttcaggaaacctggacctgacagacacaga
ctcatcacacaggtctacctctctcacactgcatggacagagccgtctcagattgaggtt
cgcctcctgctcgcctacagctcctcctccacctccctgtcagtcctccactccaagcag
cagggatggagcgagagcatcgacagcatcccgccacctgaggccgccgtcgagggaacc
attcgtttcagcaaacccgtcaaagtctacatcatgcccaaacctgccagacgctaa
DBGET
integrated database retrieval system
