Lates calcarifer (barramundi perch): 108882464
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Entry
108882464 CDS
T04895
Name
(RefSeq) transcriptional regulator Myc-B
KO
K04377
Myc proto-oncogene protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04012
ErbB signaling pathway
lcf04110
Cell cycle
lcf04218
Cellular senescence
lcf04310
Wnt signaling pathway
lcf04350
TGF-beta signaling pathway
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108882464
04012 ErbB signaling pathway
108882464
04310 Wnt signaling pathway
108882464
04350 TGF-beta signaling pathway
108882464
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108882464
04218 Cellular senescence
108882464
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108882464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108882464
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108882464
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Cell cycle controlling factors, Myc
108882464
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
108882464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myc_N
HLH
Myc-LZ
ToMV_Hel_N
Motif
Other DBs
NCBI-GeneID:
108882464
NCBI-ProteinID:
XP_018530488
UniProt:
A0AAJ7PLL5
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All DBs
Position
LG4:complement(1226289..1229485)
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AA seq
384 aa
AA seq
DB search
MPPVLTMSSTNYDYDYDTVQPYFLDGEEEDFYPPPRSQLLLGPGEDIWKKFELLATPPLS
PSRTPSLSDVPPSAADHLEAVSDLLDEDRNPSAAAFLQSFIIQDCMWSSSFAAATKLEKV
VSERLASLRARRDSTCTSTNTNGAADGAADQQVDTGYLQDLHPPATDCIDPSVVFPYTTL
SERSADGAAVEAGSELRLDTPPLSSSDSESEEEEVEEEEEEEIDVVTVDRRKTSRRSDTS
PLVLKRSHINIHQHNYAAQQPSATREQPAIKRIRSEVASPASPRRRCWSPRSDGEDGDDR
RRTHNVLERQRRNELKMSFLALRDEIPAVARNDKAAKVVILKTATEFIRKIREDERRLLT
MKDELRRRSRELKLRLQQLRTHQT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggtgttgaccatgtccagcacaaactacgattacgactacgacacggtccag
ccctacttcctggacggcgaggaggaggacttctaccctcctccacgcagccagctcctc
ctcggccccggtgaggacatctggaagaagtttgagctgctggcgacgccccccctgtcc
ccgagccggacgccatccctgtctgacgtccccccgtccgccgccgaccacctggaggcc
gtgtccgacctgctggacgaggaccgcaacccctcggctgccgccttcctccagtccttc
atcatccaggactgcatgtggagcagcagcttcgccgccgccaccaagctggagaaggtg
gtgtcagagaggctggcctcgctgcgggcccgccgagactccacctgcaccagcaccaac
actaacggcgccgcagacggagcagctgatcagcaggtggacacaggctacctgcaggac
ctccacccaccggccactgactgcatcgacccctccgtggtgtttccgtacaccaccctg
agcgagaggagcgctgacggagcagcggtggaggcggggtcagagctgcgtctggacaca
ccgccactcagcagcagtgacagcgaatcagaagaagaagaagtggaggaggaggaggag
gaggagatcgacgtggtgacggtggacaggaggaagacgtcgcggcggtcggacacgtcc
ccgctggttctcaaacgctcccacatcaacatccaccagcacaactacgccgcccagcag
ccgtcagcgacccgcgaacagcccgccatcaaacgcatcaggtcagaggtcgcctcccca
gcgtcgccgaggcgccggtgctggagtccgcggtcggacggagaggacggagacgacaga
cgcaggactcacaacgtcctggagaggcagcggcggaacgagctgaagatgagcttcctg
gctctgagggacgagatcccggcggtggctcgcaacgacaaagcggccaaggtggtgatc
ctgaagacggcgacagagttcatccgtaagatcagagaggacgagaggaggctgctgacg
atgaaggacgagctgaggaggaggagcagagagctgaagctcaggctgcagcagctcagg
actcatcagacctag
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