Lates calcarifer (barramundi perch): 108882509
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Entry
108882509 CDS
T04895
Symbol
acta1a
Name
(RefSeq) actin alpha 1, skeletal muscle a
KO
K12314
actin, alpha cardiac muscle
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04814
Motor proteins
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108882509 (acta1a)
04820 Cytoskeleton in muscle cells
108882509 (acta1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108882509 (acta1a)
04261 Adrenergic signaling in cardiomyocytes
108882509 (acta1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108882509 (acta1a)
04147 Exosome [BR:
lcf04147
]
108882509 (acta1a)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
108882509 (acta1a)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108882509 (acta1a)
Exosomal proteins of bladder cancer cells
108882509 (acta1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
108882509
NCBI-ProteinID:
XP_018530559
UniProt:
A0A4W6DY64
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Position
LG5:1958049..1962103
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AA seq
377 aa
AA seq
DB search
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgatgatgagaccaccgccctcgtctgtgataacggctccggcctggtgaag
gctggcttcgccggagacgacgcccccagggccgtgttcccctccatcgtcggtcggccc
cgtcaccagggtgtgatggtcggcatgggtcagaaggactcgtacgtgggcgacgaggcc
cagagcaagaggggcatcctgaccctgaagtaccccatcgagcacggcatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggccccc
gaggagcaccccaccctgctgaccgaggcccccctcaaccccaaggccaacagggagaag
atgacccagatcatgttcgagaccttcaacgtccccgccatgtacgtggccatccaggcc
gtgctgtccctctacgcctccggtcgtaccaccggtatcgtcctggactctggtgacggt
gtgacccacaacgtgcccatctatgagggctacgctctgcctcacgccatcatgcgtctg
gacctggcgggtcgcgatctgaccgactacctgatgaagatcctgaccgagcgcggctac
tccttcgtcaccaccgccgagcgtgagatcgtccgcgacatcaaggagaagctctgctac
gtggctctggacttcgagaacgagatggccaccgccgcctcctcctcctccctggagaag
agctacgagctgcccgacggtcaggtcatcaccatcggcaacgagcgtttccgctgcccc
gagaccctgttccagccgtccttcatcggtatggagtccgccggtatccacgagaccgct
tacaacagcatcatgaagtgcgacatcgacatccgcaaggacctgtacgccaacaacgtg
ctgtccggcggcaccaccatgtacccgggtatcgccgaccgcatgcagaaggagatcacg
gctctggctcccagcaccatgaagatcaagatcatcgcccctcctgagcggaaatactcg
gtctggatcggcggctccatcctggcctccctctccaccttccagcagatgtggatcagt
aagcaggagtacgacgaggccggtcccagcatcgtccaccgcaagtgcttctaa
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integrated database retrieval system