Lates calcarifer (barramundi perch): 108883134
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Entry
108883134 CDS
T04895
Name
(RefSeq) homeobox protein otx5
KO
K09337
cone-rod homeobox protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883134
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108883134
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
DUF5930
Motif
Other DBs
NCBI-GeneID:
108883134
NCBI-ProteinID:
XP_018531546
UniProt:
A0A4W6E5C2
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Position
LG21:complement(2419595..2424550)
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AA seq
296 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHTAAVGYPSTPRKQRRERTTFTRAQLDILEALFAK
TRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQSKPRPPKKKASPAREA
NTEASANPTNGPYSPPPPPPGTAITPSSSSASATVSIWSPASISPLPDPLSASTTPCMQR
TTTYPMTYTQAPAYSQSYAGSSSYFTGLDCSSYLSPMHPQLSGTGGALSPITASSMGGPL
SQSPASLSSQGYTAASLGFGAVDCLDYKDQAAWKLNFNATDCLDYKDQNSWKFQVL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccacattacgccgtgaacgggttaacgctgtccggcccg
ggcatggatctgctccacaccgccgccgttggataccccagcaccccgcgtaaacagcgt
cgggagcgcaccaccttcacacgcgcacagctggacatcctggaagctctgttcgccaaa
acccgctacccagacatcttcatgagggaggaggtggccctgaagattaacctgcctgag
tccagagtccaggtctggttcaagaaccgtcgtgccaagtgccgccagcagcagcagcag
agcacaggccagtccaaaccacggccccctaagaagaaggcgtccccggctcgtgaggcc
aacacagaggccagtgccaatcccaccaacggaccctacagccctccgccccctccgccg
ggcaccgccatcacccccagctccagctcagccagcgccacggtgtccatctggagcccg
gcctccatctccccgctgccagaccccctgtctgcctccaccaccccctgcatgcagcgc
accaccacctaccccatgacctacacccaggccccggcctacagccagagctacgccggc
tcctcctcctacttcaccggcctggactgtagctcctacttgtcccccatgcacccgcag
ctgtcgggcaccggtggagcactgagccccatcacggcctcctcaatggggggccccctc
agccagtcccccgcctcgctctcctcgcagggctacacggccgcctcgctgggcttcgga
gctgtcgactgtctagactacaaggaccaagctgcctggaagctcaatttcaacgccact
gactgtctagactacaaagaccagaactcctggaagttccaggtcctgtaa
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