Lates calcarifer (barramundi perch): 108883170
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Entry
108883170 CDS
T04895
Symbol
tlr18
Name
(RefSeq) toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04620
Toll-like receptor signaling pathway
lcf05132
Salmonella infection
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108883170 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108883170 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108883170 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
108883170 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883170 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108883170 (tlr18)
04054 Pattern recognition receptors [BR:
lcf04054
]
108883170 (tlr18)
04090 CD molecules [BR:
lcf04090
]
108883170 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108883170 (tlr18)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
Toll-like receptors
108883170 (tlr18)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
108883170 (tlr18)
Pattern recognition receptors [BR:
lcf04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
108883170 (tlr18)
CD molecules [BR:
lcf04090
]
Proteins
108883170 (tlr18)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Hyaluronan
Cell surface receptors
108883170 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_NXF1-5
LRR_9
LRR_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
108883170
NCBI-ProteinID:
XP_018531596
UniProt:
A0A4W6CDK8
LinkDB
All DBs
Position
LG15:complement(2611940..2628032)
Genome browser
AA seq
878 aa
AA seq
DB search
MIWKVINFSALLLGALTSPTPSSPPISNTEEGPCRIYNSGSSADCLGRQLNSVPWRQFPS
TLEAVDLSYNKLQAVHADDFLRLPRLRKLLLQYNNISHIDDDAFKNNTLLEHLDIFNNSL
QEIPARALTPLLNLKKLYMSNNLYKHATLADSFSKFVKLQVLSMGGPLVMGLKKADFQPL
KNIKLQGFSVKCSSNLSYYEPGSLEIIQTQMMGFDMAIDQRPSALPHMLRDLANKTFSLI
QFRNLFEFTYYMEKEDIFQGLKDITANQLIFHRGKFNENLLRMALMNLQVTPIKWLRLQY
IDFARSPTFVDSGAGSSITDLELDKLDLWYISNPDILRFDWRFTWFNKIKDLSIRYVYFN
SVPCDSWVEMEGVESLDVSNNRLQNEFIFNQRCDYKGSMPNLHTFNLSTNELTSLKDLSS
LTREFQQLQVLDLSNNKLGSAENSQDCVWQQNITHLIAHHNQFVSEALCCLPTTVHYLDL
SYCNLDQLDMMYFEKATNLKELLLSGNKIKFIPSKWESLSLQSLALDGNSFGLISKASFQ
DMPRLSQLRAGNNPYHCTCELHAFVQDTISQGKVNLTDWPWNYRCYHPEAFLNTVISKYF
PGHVACDIRLVIVICVATTTAVILILMLICYIFDLPWYTKATYQIIRAKYRAHKEKAAGE
LGTFTYHAFISYSHSDADWVRDELLPCLENNRNPYRLCIHERDFMPGKWIIDNIIENIEN
SRKVIFVLSRHFVNSEWCNYELYFAQQRAMGKTFSDVILVVKEPIDPNSLPSKYCKLKKM
LSTKTYLEWPQHANQQVFFWEQLRSVLGKPTMTREGTHSVKSRTSSEGGISVIGLPMEDQ
RPEVVKPNMDQEEELGNKIINRNNHELSNQGQIPVVAF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgatttggaaagtgattaatttcagtgctctccttcttggagcactcacatccccaact
ccatcttcaccccccatctctaacactgaggaaggaccatgtcgcatctacaactctggc
agctctgcagactgtctgggtagacagctcaacagtgtcccctggagacaatttccatcc
acacttgaagctgtagatctctcctacaataaacttcaagctgtccatgctgatgacttc
ctccgcctccctcggcttcgcaagcttctgctgcagtacaataacatctcacacattgac
gatgatgcctttaaaaacaacacgctactggagcatcttgacatctttaataactccctg
caggaaattcctgccagagctctgacgcctctcttgaatctaaagaagctctacatgtcc
aataacctttataaacatgccactttagctgatagcttctccaaatttgtcaaactccag
gttttgtcaatgggtggtcctctggtgatgggtctaaagaaagcagattttcagccactg
aagaacatcaagttacaaggattttcagtcaaatgctcctccaatctaagctactatgag
cctggaagtttagaaatcattcagacgcagatgatgggcttcgatatggccatagatcaa
cggccaagtgctctccctcacatgctacgagacctcgccaacaagacattcagcctcatc
cagttccgtaatctctttgagttcacttactacatggagaaggaggacatttttcaagga
ttaaaagacatcacagccaatcagcttatctttcacagaggtaaattcaacgagaatctc
ctgaggatggctttaatgaacttacaggtcacccctatcaaatggttgagacttcagtac
attgactttgcccgttcacccacgtttgttgacagtggagcaggttccagcatcacagac
ctggaactagataagttggatctttggtatatcagcaatcctgatatactgagatttgac
tggcgtttcacctggttcaacaaaattaaggatctgtccattcggtatgtgtatttcaac
tccgtgccttgtgactcctgggttgagatggagggtgtggagtccctggacgtttccaat
aatcgactacagaatgaattcatcttcaaccagcggtgtgattataagggctccatgcca
aatcttcacactttcaacctcagcacgaatgaactgacaagcttaaaagacttgtcatca
ctaacaagggagttccagcagcttcaggtgttggatttaagcaacaacaaacttggatct
gctgaaaacagtcaggactgtgtttggcaacaaaatatcactcatcttatcgctcaccac
aatcagtttgtaagtgaagccctctgttgtctgcccaccaccgtgcactatttggacctg
tcttactgcaacctggaccagctggacatgatgtactttgagaaagcaactaacctgaaa
gagctcctgctgagtgggaataaaatcaagttcatcccatccaagtgggagagtctgtca
ctgcagtcactagctttggatgggaattcgtttggcctcattagcaaggcgtccttccag
gacatgcctcggctgtctcaactgagagcggggaataatccttaccattgcacttgtgag
cttcatgctttcgtccaggacacaatttcacaaggcaaggtgaacctcacagactggcct
tggaactacagatgctaccacccagaggctttccttaacacagtcatatccaaatacttc
ccaggtcacgtggcttgtgatatcagactagttatcgtcatctgtgttgcaaccactaca
gcagtgatcttgatactgatgctgatctgctatatttttgacctcccgtggtacactaaa
gccacatatcagatcatcagggccaaatacagagctcataaggaaaaagcagcaggggaa
ttagggacttttacctatcatgccttcatatcctacagccactccgatgcagactgggtg
agggacgagctcttaccctgtttggagaacaacagaaacccctaccgtctgtgtatccat
gagagggatttcatgccaggaaagtggatcatcgataacatcattgagaacattgaaaac
agtcgaaaggtaatatttgtcctctcacggcattttgttaacagtgagtggtgcaactat
gagctgtactttgcccagcagagagcaatgggaaagaccttcagtgatgttatcctggtg
gtaaaggagcccattgatcccaactccctgcccagcaagtactgcaagcttaagaagatg
ctcagtactaagacgtacctggaatggccccagcatgccaaccagcaggtgtttttctgg
gagcagctgaggagtgttttgggcaagccgacaatgaccagagagggtacacacagtgtc
aagagcagaacttcatctgagggtggcatttctgtgattgggctccctatggaggatcag
aggccagaagtagtgaaacctaacatggatcaagaagaggaactcggaaacaagattatt
aacaggaataatcatgagttgtccaatcagggacaaatacctgtggtggcattttga
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