KEGG   Lates calcarifer (barramundi perch): 108883305
Entry
108883305         CDS       T04895                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 2
  KO
K07967  beta-1,4-galactosyltransferase 2 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00052  Galactose metabolism
lcf00510  N-Glycan biosynthesis
lcf00513  Various types of N-glycan biosynthesis
lcf00514  Other types of O-glycan biosynthesis
lcf00515  Mannose type O-glycan biosynthesis
lcf00533  Glycosaminoglycan biosynthesis - keratan sulfate
lcf00601  Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100  Metabolic pathways
Module
lcf_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
lcf_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    108883305
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    108883305
   00513 Various types of N-glycan biosynthesis
    108883305
   00515 Mannose type O-glycan biosynthesis
    108883305
   00514 Other types of O-glycan biosynthesis
    108883305
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    108883305
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    108883305
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lcf01003]
    108883305
Enzymes [BR:lcf01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     108883305
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     108883305
    2.4.1.90  N-acetyllactosamine synthase
     108883305
Glycosyltransferases [BR:lcf01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   108883305
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2 Adeno_E1A
Other DBs
NCBI-GeneID: 108883305
NCBI-ProteinID: XP_018531789
UniProt: A0A4W6BQL9
LinkDB
Position
LG4:complement(8956447..9107965)
AA seq 383 aa
MTRLMLGRTLERICKGVLLLCLLHFLIMMILYFDVYSQRFDLFSRFNNGRNGSRNNVSGA
AGSGHHYYYYNLSRPNATLASYLATGEQLVPSVQPETNQTPSPKPLPPCPENPPGLVGRL
LIEFSSQMTMERVQKENPNVTEGGRYTPPDCRPRWKVAIIIPFRHRENHLKYWLHYLHPI
LRRQRIDYGIYIINQLGEDTFNRAKLLNVGYTEALKDAEYDCFIFSDVDLIPMDDRNLYH
CYDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKKQFLKINGFPNEYWGWGGEDDDIYNRI
TLNGMKVSRPDVRIGRYRMIKHERDKHNEPNPQRFNKIQNTKNTMKKDGISSLTYRVVQV
KRYPLYTNISVEIGKPPPRPIKG
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgacccggctgatgctgggccggactctggagcgcatctgcaaaggcgtcctgctgctc
tgcctgctccacttcctcatcatgatgatcctgtactttgacgtctactcgcagcgattc
gacctcttcagccgcttcaacaacggacgcaacggatccaggaataacgtcagtggggcg
gcaggaagtggacatcattattactactacaacctttccaggccgaatgcgacactagcc
agctacctggccacgggggaacagctggtgccaagcgtgcagccagagaccaatcagacg
ccttcccccaagccgctgccgccgtgccctgagaacccgcctggcctggttgggcgtttg
ttgatcgagttcagctcccagatgacgatggaacgagtgcagaaagagaaccccaacgtg
acagagggaggccgctacacccctcccgactgtcggcctagatggaaggtggccatcatt
atcccattccgtcacagagaaaaccacctgaagtactggctccactacctccaccctatc
cttagacggcagaggattgactacggcatctacatcatcaaccagctgggtgaggacact
tttaaccgtgccaagctgttgaacgttggctacacggaggctctgaaggacgcagagtac
gactgtttcatctttagtgacgtggacctgatcccaatggacgaccgcaacctctaccac
tgctacgaccagcccagacacttcgccatcgccatggacaaatttggtttcaggctgccg
tatgcaggctacttcggaggagtttcaggcctcagtaaaaaacagtttctgaagatcaac
ggctttcccaacgagtactggggctggggaggggaggatgacgacatctacaacaggatc
actctgaatgggatgaaggtgtccaggccagacgttcgcatcggccgctacagaatgatt
aaacacgagagagacaaacacaacgagcccaacccacagagattcaataaaatacagaac
acaaagaacacaatgaagaaggacggcatcagctctctgacctacagagtggttcaggtc
aagaggtatcctctgtacacaaatatctctgtggagatcggcaagccaccacccaggcct
atcaagggctag

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