Lates calcarifer (barramundi perch): 108883305
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Entry
108883305 CDS
T04895
Name
(RefSeq) beta-1,4-galactosyltransferase 2
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00052
Galactose metabolism
lcf00510
N-Glycan biosynthesis
lcf00513
Various types of N-glycan biosynthesis
lcf00514
Other types of O-glycan biosynthesis
lcf00515
Mannose type O-glycan biosynthesis
lcf00533
Glycosaminoglycan biosynthesis - keratan sulfate
lcf00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100
Metabolic pathways
Module
lcf_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
lcf_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108883305
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
108883305
00513 Various types of N-glycan biosynthesis
108883305
00515 Mannose type O-glycan biosynthesis
108883305
00514 Other types of O-glycan biosynthesis
108883305
00533 Glycosaminoglycan biosynthesis - keratan sulfate
108883305
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108883305
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108883305
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
108883305
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
108883305
2.4.1.90 N-acetyllactosamine synthase
108883305
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
108883305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Adeno_E1A
Motif
Other DBs
NCBI-GeneID:
108883305
NCBI-ProteinID:
XP_018531789
UniProt:
A0A4W6BQL9
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All DBs
Position
LG4:complement(8956447..9107965)
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AA seq
383 aa
AA seq
DB search
MTRLMLGRTLERICKGVLLLCLLHFLIMMILYFDVYSQRFDLFSRFNNGRNGSRNNVSGA
AGSGHHYYYYNLSRPNATLASYLATGEQLVPSVQPETNQTPSPKPLPPCPENPPGLVGRL
LIEFSSQMTMERVQKENPNVTEGGRYTPPDCRPRWKVAIIIPFRHRENHLKYWLHYLHPI
LRRQRIDYGIYIINQLGEDTFNRAKLLNVGYTEALKDAEYDCFIFSDVDLIPMDDRNLYH
CYDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKKQFLKINGFPNEYWGWGGEDDDIYNRI
TLNGMKVSRPDVRIGRYRMIKHERDKHNEPNPQRFNKIQNTKNTMKKDGISSLTYRVVQV
KRYPLYTNISVEIGKPPPRPIKG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacccggctgatgctgggccggactctggagcgcatctgcaaaggcgtcctgctgctc
tgcctgctccacttcctcatcatgatgatcctgtactttgacgtctactcgcagcgattc
gacctcttcagccgcttcaacaacggacgcaacggatccaggaataacgtcagtggggcg
gcaggaagtggacatcattattactactacaacctttccaggccgaatgcgacactagcc
agctacctggccacgggggaacagctggtgccaagcgtgcagccagagaccaatcagacg
ccttcccccaagccgctgccgccgtgccctgagaacccgcctggcctggttgggcgtttg
ttgatcgagttcagctcccagatgacgatggaacgagtgcagaaagagaaccccaacgtg
acagagggaggccgctacacccctcccgactgtcggcctagatggaaggtggccatcatt
atcccattccgtcacagagaaaaccacctgaagtactggctccactacctccaccctatc
cttagacggcagaggattgactacggcatctacatcatcaaccagctgggtgaggacact
tttaaccgtgccaagctgttgaacgttggctacacggaggctctgaaggacgcagagtac
gactgtttcatctttagtgacgtggacctgatcccaatggacgaccgcaacctctaccac
tgctacgaccagcccagacacttcgccatcgccatggacaaatttggtttcaggctgccg
tatgcaggctacttcggaggagtttcaggcctcagtaaaaaacagtttctgaagatcaac
ggctttcccaacgagtactggggctggggaggggaggatgacgacatctacaacaggatc
actctgaatgggatgaaggtgtccaggccagacgttcgcatcggccgctacagaatgatt
aaacacgagagagacaaacacaacgagcccaacccacagagattcaataaaatacagaac
acaaagaacacaatgaagaaggacggcatcagctctctgacctacagagtggttcaggtc
aagaggtatcctctgtacacaaatatctctgtggagatcggcaagccaccacccaggcct
atcaagggctag
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