Lates calcarifer (barramundi perch): 108883593
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Entry
108883593 CDS
T04895
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883593 (tcf3a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
108883593 (tcf3a)
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GFIT
Motif
Pfam:
HLH
DUF3530
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
108883593
NCBI-ProteinID:
XP_018532445
UniProt:
A0A4W6EDG9
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Position
LG4:15026678..15050451
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AA seq
624 aa
AA seq
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MAAVETDKELSDLLDFSAMFEPPVSNGKSRQTTLRREFGSSDDRTGSSPWGPGEQNSPSF
NQGRVYGEEGLYSEQEGMASAPIFGSGIVGKAERGPYSSFAAQPGFMPSEIPMPSPDPLS
PSGLKPNSQFYSSYEGSNTRRRPSQEPTGPQPKKIRKVPPGLPSSVYAPTSGEDFNRDSA
GYQASKTGNVYPPPFYMQEGLHPPSDPWGSAGSMVQPGFSSMLGNSPHLSQHGPFTAINP
QDRLKRQPLPLSPQNYPLHGSEVNGAHPAGFHSGSSSFASHTPPITGTETIMANRGAVPG
SSGDEIGKALASIYPSDPNSTAFPPSPSTPSGSPQAVSGSASQWTRSSGQATPSPNFEGG
IQSMQSKMEDRLDEAINVLQRHASGQGLAEMHSLLASGLGLPPGFSSAALGLASRLPGLV
SSHHEDSVGLPSSGGLLHSHHGPTSVQPSSQPEGFTGLPGSLNRSSSADIKQEEKEDDEN
CSITDKSEDEKKEMKARLRTSCSVVSVSDENLTAEEKEQRERERRLANNARERVRVRDIN
EAFRELGRMCQVHLQSDKAQTKLVILQQAVQVILGLEKQVRERNLNPKAACLKRREEEKV
DPQMQLGGGHPGLGGDGHNPVSHM
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtggaaacagacaaggagctcagcgacttgctggattttagcgcgatgttt
gagcctccagtttcaaatggcaagagccggcagactactctccgcagagagtttggaagt
tcagatgacagaactgggtccagcccctggggaccaggagaacagaacagtccatctttc
aaccaaggaagggtttatggagaagaaggcctttacagtgaacaggagggtatggcttct
gcccccatatttggatcagggattgttgggaaggctgagcgaggaccgtactcgtcattt
gcagcacagcctggctttatgcccagtgagatacccatgcccagtcctgatcccctatcc
ccatctggcctgaagcccaactcccagttttattcctcttatgaggggagcaatactcga
aggagaccctcacaggaacccactggaccacagccaaaaaagatcaggaaggtgccccct
ggcctgccctcctcggtttatgcaccaacctctggagaggattttaacagggacagtgct
ggctaccaggcctccaagactggaaacgtgtacccaccaccattctacatgcaagaaggc
ctccacccgccctctgatccatggggctctgccgggtcgatggttcagcctggtttttct
tctatgctgggcaactccccccatctgagccagcatggtccctttaccgccatcaacccc
caagacagactgaaacggcagccactgcccctctccccgcaaaactaccccctgcatggc
agtgaggtgaatggggctcatcctgctggcttccactctggctccagcagctttgccagc
cacacaccccccatcactggaactgaaaccattatggccaatcggggagcagtacctggg
agctcaggtgatgagattggaaaagccctggcatctatctatccttcagacccaaacagc
actgccttccctccatccccgtctactccctctggctctcctcaggctgtatcaggctct
gcatcacagtggactcggtcctctggccaggccacaccttcacctaactttgagggtggg
attcagtccatgcagagtaaaatggaggaccgcctggacgaagccatcaatgttcttcag
cgtcacgccagtgggcaagggctggctgaaatgcacagtctgctggcatctggcttaggg
ctacctccaggcttcagcagtgcagcacttggactggccagtcgcctgcctggactggtg
tctagtcaccatgaggactctgttggtctgccctctagtggaggacttttgcacagtcac
cacggccccacatctgtccagccaagctctcagcctgaaggttttactggtctgcctggc
agcctaaatcgttccagtagtgcagatatcaaacaagaggagaaggaggatgatgagaac
tgctccattactgacaagtcagaggatgagaaaaaagaaatgaaggcccgtctccgaaca
agctgcagtgttgtctcggtgtctgatgagaacctgactgctgaggagaaggagcagagg
gagcgcgagcgccgcctagctaacaacgctagggagagggtgcgtgttcgcgacattaac
gaagccttcagagagctgggcaggatgtgtcaggtccacttgcagagcgacaaggcccag
accaagcttgtcatcctgcaacaggctgtccaggtcatcctgggcctggagaagcaggtg
cgagaacgcaacttgaacccaaaggctgcctgcctcaagaggagagaggaggagaaagtg
gacccccagatgcagcttggtgggggtcaccctggtttaggaggagatggacacaaccct
gttagccatatgtaa
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