Lates calcarifer (barramundi perch): 108883706
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Entry
108883706 CDS
T04895
Name
(RefSeq) metal-response element-binding transcription factor 2 isoform X1
KO
K11485
metal regulatory transcription factor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108883706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883706
03036 Chromosome and associated proteins [BR:
lcf03036
]
108883706
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108883706
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108883706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
ASH2L-like_WH
DUF4537
zf_RING_Vps8
PHD_ash2p_like
PHD_NSD
PHDvar_NSD
Rad9_Rad53_bind
Motif
Other DBs
NCBI-GeneID:
108883706
NCBI-ProteinID:
XP_018532657
UniProt:
A0AAJ7PN33
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All DBs
Position
LG4:complement(16883033..16893032)
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AA seq
616 aa
AA seq
DB search
MRDSGVVDHLSVHHRAHPQRQQQAVSLSPTSLSARGEYGGDGMSGRFTEGQDVLARWSDG
LFYLGTITKIDRDKQRCFVVFEDRSKSWVLWKDIQTGEEDDEDDEDDDIVCSICQDETSE
EPNEIVICDKCGQGYHQLCHSPIIDASVIDSDDKWLCSECELTSMPKRGGAHRRGASAKG
FLQPQQQQQHMELHLSFPYAPEELVWDQGHKTNTQQCYCYCGGPGEWYLKMLQCNRCQQW
FHEACLHCLQMPMLYGDRFYLFVCSVCNGGPEYLNRLPLRWEDVTHLSLYNLSVIHKKKY
FDSEMDLMAYINDNWELLQLGEQLAKTPRSERYESVLEALNNNSSMFMSGKEVKKKKHLF
GLRIRFPPAPPNSNEPTSRVMERASHEITIKGCKSTKAPSGMRPLTNGTEKKKKKRKQGA
RSLETLAKPQRSSELLSQQIRKPLPLESHAFDHLTSIKSDRSLLSSRTSDVESIGALSTS
ETTSTSISRQSSLCSSSKTRTTACVMPVSSPPIKRKRGRPRRALQPPNPEIPPPSHTDPN
PSATEMLSTLPGLHSADIVHGMDPNSQLSHLKSSISSYFGAAGRLACGEKYKVLARRVTL
DGKVQYLVEWEGVTAS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagagactcaggggttgtggaccacctgtctgtccatcacagagctcacccccagcgg
cagcagcaggctgtgtccttgtcccccacaagcctctctgctaggggagagtatggagga
gacggcatgtctggcaggtttacagagggacaggatgtcttggcccggtggtcggatggc
ttgttctacttggggacaatcacaaagatagatcgggacaagcagagatgctttgttgtc
tttgaggatcggtcaaagtcatgggttctttggaaggatattcagacaggggaggaagat
gatgaggatgatgaggacgatgacattgtgtgctccatatgccaggatgagacttcagag
gaacccaatgagattgtcatttgtgacaagtgtggacaaggctaccaccagttgtgccac
tcccccatcattgatgcctctgtcattgactcagatgataagtggctctgctcagagtgt
gagctcacttctatgcctaagagggggggggcacacaggaggggagcgtctgctaaaggc
ttcctgcagccacagcagcagcagcagcacatggagctgcacctgtccttcccgtacgct
ccggaagaactggtgtgggaccaaggccacaaaactaacacccagcagtgttattgctac
tgtggaggcccaggagagtggtacctgaagatgttgcagtgtaacaggtgtcagcagtgg
ttccatgaggcctgtctccattgcttacagatgcccatgctctacggagataggttttat
ctgtttgtttgttccgtttgcaatggtggaccagagtacctcaaccgactgcctcttaga
tgggaagatgtcacacacttgagtctgtacaacttgagtgtgatccacaagaagaagtac
tttgactctgagatggacctgatggcttatatcaatgacaactgggagctgctgcagctc
ggggagcagcttgccaagactccaagatcagagcgatatgaaagtgttctagaggcatta
aacaacaacagcagcatgttcatgtcagggaaggaagtaaagaaaaagaagcacttattt
ggcctgaggatccgtttccctcctgctcccccaaactctaacgagccaaccagcagagtg
atggagagggcttcacatgaaatcaccattaagggatgcaagtccaccaaagccccgtct
ggcatgagacctttaaccaatggcacagagaagaagaagaaaaagaggaagcaaggagct
cgttctctggagactctggctaaaccacaacgctccagtgaactcttgtcccagcaaata
agaaagcctctaccactagagtcccatgcatttgatcacctaacttctatcaagagtgac
aggtctctgctgtcttcacgaacttcagatgtggaatccataggagccctgagcacctca
gaaactacctcaactagcatttcaagacagtccagcctctgtagctccagcaagacacgt
acaacagcctgtgtcatgcctgtttcctctccacccataaaaaggaaacgtgggcggcca
cggcgggccctgcagccccctaacccggagatcccccctcccagccacacagacccaaac
ccctcagcgacggagatgctgagcaccctgccagggcttcactcagcagacatagttcat
ggcatggaccccaacagccagctctcccacctcaaaagctccatcagcagctatttcgga
gcagcggggcggctggcttgcggggaaaagtacaaagtcttggcccgacgggtcaccctc
gacggcaaggtgcagtacctggtggagtgggaaggagtcactgcctcttag
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