Lates calcarifer (barramundi perch): 108884019
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Entry
108884019 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: evC complex member EVC
KO
K19605
ellis van creveld syndrome protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108884019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108884019
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
EVC complex
108884019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EVC_N
EVC_C
CoA_transf_3
DUF6364
Motif
Other DBs
NCBI-GeneID:
108884019
NCBI-ProteinID:
XP_018533142
LinkDB
All DBs
Position
LG12:17838822..17845604
Genome browser
AA seq
968 aa
AA seq
DB search
MAEQELIAECGVDVMVFFAESSYIYTELLTVATVCGGLSGMIAAAFLYVYCLKPLLLTRQ
GYNARRLLEPDEGELENNESDCVSNSRKEAASGTTNEKEKKQPPMNSDVAAFASRAKVVY
PINQKYRPLADGASNPSLHEHSKLPAMPHEESSSSTDGESLSQEQDNDDSSHFISSSLVP
KSLQNQSFTRVSHYPHTLIQTGFEGRISLYCLALQDIQQHCSQLQEEKYLIFLQMVKIIF
SGRFPKDKNDADFCKNTLQMQEKELNELKKQLPSGQTASEKNNDTPCTLEEIERAQKDLL
ERGLQMSKGFSKQVEDLCQHLLKKTSIFSPDEAQDVIQSLIQTLLLVENHLVNTQEADLT
RIQQKLLWWEELTGLLQSQPALLKREVSLRQGLIATALEQLTSDDILTFSHMEKILSEVQ
ATLTEGLQQCTEECTQKTKELVNEKCSKIESKRRKLQRSQAKEKTRXLELRQTHSDLQQL
TKVYQELLVKHRQQIADLELQQENRAAEALCDLWRKLRTSWSKKLGELAKDVFLASVPAQ
SKLSAERCEKLWLDLEQKLAAQLQQAECTIKLQLEDMRAQLDKDGQVWSEEMALVQACLK
HLSEQQMKILQTMVARQSYTLNSPVRMLIEKKHEHLLVAVQRSFVVRHVCLHMLKEMRLS
KLKVLSQTDFRAVLMEDPSKSQPCVSSALKNSSASLAERHLGPESQLVGHSFQQEFLSEL
ETGMELLQSHAQLVLGNALSQAIQQMMETPSVESQTSTKLDDNLKHHLIEAASESVYVTK
DSLTALVQNYYSHLQDITKKLQQDQSNRNQDVNEKQESSSHLNRALQRELVNWGKKPTSA
EFQQRVELHKRRVLELCDLEQEMIYEELRGKKVARDQTLEMIKKQLLEAEESFITELADL
ARISLHSPEPEPSGEEDNTGNQRATILDLLALNPALDPALNPSLTPTIVTPVVKSKPKKK
VEKESHLS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaggagctgatagcggaatgtggcgtggacgttatggtttttttcgccgag
tcgtcgtacatatacacagaactgttaacggtggccacagtgtgtggagggctgtcggga
atgatagctgctgcatttttatatgtctactgcctgaagcctctgctgttgacgagacaa
ggctataatgcaaggaggctgcttgaacctgatgaaggagagttagagaacaacgaaagt
gactgtgtcagcaacagcagaaaggaggctgcaagtggtacaactaatgaaaaagagaag
aagcagccacccatgaacagtgatgtggctgcatttgcatccagagcaaaggtggtttat
cccatcaaccaaaaatacagacctttagcagatggagcgtccaacccgtcgctacatgaa
cactccaagttgccggcaatgcctcatgaggagtcatcctcctccacagacggagagtct
cttagccaagagcaggacaacgatgacagcagtcactttatctcctcctcgctggtcccc
aagagcctgcagaaccagagctttaccagggtctctcactaccctcacacactgatacaa
acaggttttgaaggtaggatcagcctttactgtttggccctgcaggatatacaacagcat
tgctctcagcttcaagaagaaaaatatctgattttccttcaaatggtaaaaataatattc
agcggccggtttccaaaagacaaaaatgatgctgacttctgcaagaatactcttcaaatg
caggaaaaggaactaaatgagcttaagaaacagttgccatcaggccagactgccagtgag
aagaacaatgatactccctgtacactggaggagattgagagagctcagaaagatctcctt
gaacgtggccttcaaatgtccaaaggtttcagcaagcaggtggaggacttgtgtcaacat
ctcctgaagaagaccagcattttctctccggatgaagcccaggatgtgattcagtctctc
atccagactcttttgttagtagagaatcacctggtgaacacacaagaagcagacctaaca
aggatacaacagaagctgctgtggtgggaggagctgacagggcttcttcagtcccagcct
gccttgttaaagcgggaagtgtctcttaggcagggcttgatagccacagcactggagcag
ctgacgagtgatgacatcttgacctttagccacatggaaaagatactttcagaagttcag
gccactctgactgaaggtctccaacagtgcactgaggagtgcacacagaaaacaaaggag
ctggtgaatgaaaagtgcagcaaaatagagtccaagcggaggaagcttcagaggagccag
gccaaggaaaagacccgtngcctggaactgagacagactcacagtgacctacagcagctc
accaaggtgtaccaggagctgctggtgaaacaccggcagcagattgctgatttggagcta
cagcaggagaacagggcggctgaagcgctctgtgatctttggaggaaactccgtacctcc
tggtcaaaaaagcttggggagctagccaaggatgtctttctcgcctctgtccccgcccag
tcaaagctctcggctgagcgctgtgagaagctgtggttggatctggagcagaagctggct
gcacagctgcagcaggcggagtgcactatcaagctgcagttggaggacatgagggctcag
ctggataaagatggacaggtgtggagtgaggagatggctctggtgcaggcctgtctcaaa
catctgagtgagcaacagatgaagatcctccaaaccatggtggccagacagagctacaca
ctcaacagcccagtaaggatgctgatagagaagaaacacgagcacctgttggtggcggtg
cagaggagctttgtggtcagacacgtctgcctgcacatgctgaaggagatgaggctgtcc
aagctgaaggtgctctctcagaccgatttccgagctgtgcttatggaggatcccagtaaa
agccagccctgcgtcagttcagctctcaagaatagcagtgccagcctagcagagaggcat
ctgggtccagagagtcagctggtgggccacagcttccagcaggagttcctttccgaactg
gaaacagggatggagctgcttcagagccatgcgcagctggtgctcggcaatgccctcagc
caagccatccaacagatgatggagaccccgtctgtggagtcgcagacctctaccaaactg
gacgataacttgaagcaccacctgatagaggctgcatctgagagcgtgtatgtgaccaaa
gattctctcactgcactggtccaaaattactattcccacttgcaggacattaccaaaaaa
ctacagcaggatcagtcaaacagaaaccaggacgtgaatgagaagcaggagagcagcagt
cacctgaacagagccttgcagcgggagctggtgaactggggcaaaaaacccacctctgct
gagtttcaacagagggttgaacttcacaaaaggagggtgctggagctctgtgatctggag
caggagatgatatatgaggaactgagggggaagaaagtggcccgagatcaaactttggaa
atgatcaaaaaacagctactggaggcagaagaaagcttcataaccgagctggcagacttg
gcccggatttctctccacagtccagaaccagaacccagtggtgaagaggacaacaccggt
aatcaaagagccacgatattggacctgctggccctgaacccagcattagatccggccttg
aatccttcactgactccaactattgtaactccagtggtgaaatcaaaaccaaagaagaaa
gtagagaaagagtctcatctcagctga
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