Lates calcarifer (barramundi perch): 108884043
Help
Entry
108884043 CDS
T04895
Name
(RefSeq) vitamin D3 receptor B isoform X1
KO
K08539
vitamin D3 receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108884043
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884043
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108884043
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108884043
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108884043
Nuclear receptors [BR:
lcf03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
108884043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7206
Motif
Other DBs
NCBI-GeneID:
108884043
NCBI-ProteinID:
XP_018533182
UniProt:
A0A4W6BYW6
LinkDB
All DBs
Position
LG12:18653346..18680237
Genome browser
AA seq
426 aa
AA seq
DB search
MMEPTVVSTSTLAPDEFDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKATFT
CPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQRRKEEEAQREA
EKEARRPRLTEEQSQVIATLVEAHHKTYDDSYSDFCRFRPPVREGPVTRSASRAASLHSL
SDASSDSFSHSPESVDTRMNFNNLLMMYQEQGSSPDSSEEEGSSFSMLPHLADLVSYSIQ
KVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFNLEDMSWSCGAPDFKYQISD
VTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHARIEALQDRL
SETLQAYIQLHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEV
FGSEVS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccactgttgtgagtacgtccactctggcccctgatgagtttgacaggaac
gtgccgcggatctgtggcgtgtgtggcgacaaagccaccggcttccacttcaacgccatg
acctgtgagggctgcaagggttttttcaggcgcagtatgaagcgcaaggccaccttcaca
tgtccctttaatggcagttgcaccatcaccaaggacaacaggcgccactgccaggcatgc
cggctcaaacgctgtgtggacattggcatgatgaaagagttcattctgacagatgaggaa
gtgcagaggaagaaggacctgattcaacggaggaaggaggaggaggcacagcgcgaagca
gagaaggaggcacggcggccacggctcactgaggagcaaagtcaggtcatcgccacgctg
gtggaggcacaccacaaaacatacgacgactcctactctgacttctgccgcttcaggcct
cctgtgcgtgagggcccagtgacgcgtagcgccagcagagctgcctctctccactctctg
tctgatgcctcatctgactccttcagtcactctccagagtcagtagacaccagaatgaac
ttcaacaacctgctgatgatgtaccaggagcagggcagcagccctgactccagtgaggag
gagggctccagcttttccatgctgcctcacctggctgacctggtctcctatagcatccaa
aaggtcattggatttgccaagatgatccctgggttcagggagttgactgcagaggaccag
attgccctgctcaagtccagcgccattgaggtgatcatgctgcgctcaaatcagagcttc
aaccttgaagacatgtcctggagctgcggtgcgcctgactttaaataccagatcagtgat
gtcaccaaagcgggccacactctggagctgttggagccgctggtgaagttccaggtgggc
ctgaagaagctcaacctgcacgaggaggaacatgtgctgctgatggccatctgcttgctt
tctccagaccgcccaggtgtgcaggatcatgcacggattgaagccctccaagaccgcctt
tcggagaccctgcaggcctacatccagcttcaccacccaggcggacggctgctctacgcc
aagatgatccagaaactggccgacctgcgcagcctcaacgaggagcactccaaacagtac
cgctctctctcctttcagccggagcacagcatgcagctcaccccgctggtgttggaggtg
ttcggcagtgaagtctcctaa
DBGET
integrated database retrieval system
