Lates calcarifer (barramundi perch): 108884066
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Entry
108884066 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-galactosyltransferase 6
KO
K00734
galactosylxylosylprotein 3-beta-galactosyltransferase [EC:
2.4.1.134
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108884066
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108884066
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108884066
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.134 galactosylxylosylprotein 3-beta-galactosyltransferase
108884066
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108884066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
DUF240
Motif
Other DBs
NCBI-GeneID:
108884066
NCBI-ProteinID:
XP_018533229
UniProt:
A0AAJ7LVJ7
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Position
LG12:18983105..18986550
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AA seq
339 aa
AA seq
DB search
MNLIRLVCRHKTALVIGTVCSFAVVLVFLAKCTSETLKQGHQDPPGLAPHASALQSRPEQ
HNPPSTSKEKSAFLVVLITTGPKYTERRSIIRSTWLAKRDSDVLAMFVVGTQGLSSEDLQ
NLNTEQGRHKDLLLLPDLRDSYENLTLKLLHMYSWLDQNVEFKFVLKADDDTFARLDLLK
EELKGKEPNRLYWGFFSGRGRVKTAGKWRESSWELCDYYLPYALGGGYILSADLVHYVHL
NAGYFKTWQSEDVSLGAWLAPVDVRRTHDPRFDTEYKSRGCNNKYLVTHKQSLEDMLEKH
QTLQRDGRLCKEEVKLRLSYVYDWGVPPSQCCQRKDGIP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttatacgtctagtgtgccgccacaagacagccctggtcatcggcactgtttgc
agctttgctgtagttcttgtcttcttggccaaatgtacctcagaaaccctgaaacagggt
caccaggatcctccaggcttagctccccatgccagtgctttgcagtcccgtccagagcag
cacaaccccccctccacatccaaagagaagtcagcattccttgtggtcctcatcacaact
ggacctaagtacacagaacggaggagtatcatccgcagcacctggctcgccaagcgggac
tctgatgttctggccatgtttgtggttggaactcaggggctttccagcgaggacctacag
aaccttaacacagagcaagggcggcacaaagacctgctcttactgcctgacttacgagat
tcttacgagaacttaacactcaagctgctccacatgtactcctggctggaccagaatgtg
gagttcaagtttgttctcaaagcagatgatgacacatttgctcgcttggacctccttaaa
gaggagctgaaggggaaagagcccaaccggttgtactggggcttcttctcagggagagga
cgagtgaaaacagctggcaaatggcgggaaagctcttgggagctctgtgactactacctg
ccttatgcactgggtgggggctacatcctctcagccgacctggtgcattatgtacatctg
aatgcaggttacttcaagacgtggcagagtgaggatgtgtcactgggtgcctggctggca
ccagtggatgttcggcggacgcatgatccacgctttgacacagagtataaatcacgtggt
tgcaacaacaaatatttggtcacacataagcagagcttggaggacatgttggaaaaacat
caaactctccagcgtgatggcaggctctgcaaagaggaagtcaaactgcgattgtcctat
gtgtatgactggggtgtgccaccctcacagtgctgccaaaggaaggatggcattccttaa
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