Lates calcarifer (barramundi perch): 108884839
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Entry
108884839 CDS
T04895
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108884839
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108884839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108884839
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108884839
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
108884839
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
108884839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108884839
NCBI-ProteinID:
XP_018534449
UniProt:
A0A4W6EE34
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Position
LG12:complement(26138694..26145979)
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AA seq
714 aa
AA seq
DB search
MSNQQQGEMAAVGSGGGFSQKRNTNSQDSQQPSPLALLAATCSRIDTPGENDSPTDQQQQ
QNQQQQLDLNQGVFTSSANGWQVIPLSVQSSSGTNTVTTDTSGVMTGGDPGKSRQVLSPS
AIAASTQGQQQQPQQYVVAQAPSMQGQQVLTTISGVMPNIQYQVIPQFQTVDGQPLQFTH
AQQDSAVPAAAASGQQFQIVSSPNGQQIIAATNRAGAAGNIITMPSLLQGAIPIQNISLG
NGVLQNQPQFLANMPVSLNGNITLLPVSTGTSGTGGDANSGGDTGGNQLIHQQSQQPVSS
NSGVSYMTSASTVTTQTTSSYGMTQTQNSNGAVTGTFQQNTASSLGVPIQPDNRDGQQPQ
QILLQPQQVIQGGTPLQTIQAGTVAGGQVFAAPTLSQEGLQNLQIMPNTSPILLRTVGPN
GQVSWQTIQIQSPAGAQITLAPVQSLPQLGQAQGAAAAGGVSVNTVQIPGIQTINLNTLG
GSGLQMHQLQGVPITIAGTAGEQALQTGGESLDDSTAMDDEDISPPPQGRRNRREACTCP
FCKDGEGRSDPTKKKQHICHITGCGKIYGKTSHLRAHLRWHTGERPFVCGWSFCGKRFTR
SDELQRHKRTHTGEKKFICPECPKRFMRSDHLSKHIKTHLNKKAGTATTSSTTVTTDATS
PAAGTEAGSGAVSANDQHTIVTMETLSAESIARLASSGINMMQVDLHQINGNSY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcagcagcagggtgaaatggccgctgtggggagcggtggaggcttcagtcaa
aagcgaaacacaaactctcaagactcacagcagccatctcctctcgctttgctggcagcc
acatgcagtcgaattgacaccccaggagagaacgattcgcccacagaccaacaacaacaa
caaaaccagcagcaacagcttgacctaaaccagggtgttttcacctccagtgccaacggc
tggcaggtcatccctctcagcgtccagtcgtcctcaggcactaacacggtcaccaccgac
acttcaggggtaatgacaggaggagacccaggcaagagcagacaggtgctgtcaccatca
gcaattgctgcgagcactcagggacagcagcaacagccacagcagtacgtagtggcccag
gctccatcgatgcagggtcagcaggtgcttaccaccatatcaggcgtgatgcccaacatt
cagtaccaggttatcccccagtttcagacagtagatggccagcctctgcagttcacacat
gctcagcaggattctgctgtacctgctgctgcagcatcagggcagcagtttcagatagtg
tcctctcctaatggccagcagatcatagctgcaaccaacagagctggtgcagcaggaaac
atcataacgatgcccagcctccttcagggagccatccccatacagaacataagccttggc
aacggcgtgttacaaaaccagccccagttcctggctaacatgcctgtgtcactgaatgga
aacatcactttgttgcctgtcagtactggaacaagtggtacaggaggagatgcaaatagt
ggaggggatacagggggaaaccagcttatacatcagcaatcgcagcagccagtgtcttcc
aacagcggagtgagttacatgacaagtgcatccaccgtcaccacgcagaccacctcctct
tatggaatgacccaaacacagaacagcaatggagcagtgacagggacatttcagcagaac
actgcatcttctctgggtgtcccgatacaaccggacaacagggacgggcagcagccacag
cagatccttctccagcctcagcaggtgatccaagggggaacgcccctgcagaccatccag
gctggtacggtagcaggcggtcaggtgtttgcggctcccacgctcagccaggaagggctt
caaaatcttcaaatcatgccaaacacaagccccatcctcctgcgcaccgtaggcccaaac
ggccaggtgagctggcagaccattcagatccagagtccggcgggagcgcagatcacgctg
gccccagtgcagtctctccctcagctgggtcaggctcagggagctgctgcagctggagga
gtatcagtcaacaccgtgcagatcccaggaatccagaccataaatctcaacacgctcgga
ggctccgggcttcagatgcaccagctgcagggtgttcccatcaccatcgccggcacagca
ggagagcaggcgttacagacgggtggagaaagtttggatgatagcacagccatggatgat
gaggacataagcccaccacctcaaggacgacgcaaccggagggaagcctgcacctgcccc
ttctgcaaggacggagaaggacgcagtgaccctacaaagaagaagcagcacatttgtcac
atcactggctgtgggaagatctacggcaagacgtcccacctgagggcccacctccgctgg
cacacaggggaacgaccattcgtctgcggctggtccttctgtggaaaacgattcacccgc
tcagacgagctgcagcgccacaagaggacgcacacaggtgagaaaaagtttatttgcccg
gagtgtcccaaacgcttcatgcgcagcgatcacctctcaaagcacatcaagacccacctg
aacaagaaagcaggaaccgccaccaccagcagcaccacggtcacgaccgacgccacgtcg
cccgcagcaggaacagaagccggctccggagcggtgtcggccaacgaccagcacaccatc
gtcaccatggaaaccttatctgcggagagcatagctcggttagccagcagcgggatcaac
atgatgcaggtggaccttcaccagattaacggcaacagctactaa
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