Lates calcarifer (barramundi perch): 108885177
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Entry
108885177 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04012
ErbB signaling pathway
lcf04020
Calcium signaling pathway
lcf04068
FoxO signaling pathway
lcf04510
Focal adhesion
lcf04540
Gap junction
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108885177
04012 ErbB signaling pathway
108885177
04068 FoxO signaling pathway
108885177
04020 Calcium signaling pathway
108885177
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108885177
04540 Gap junction
108885177
09142 Cell motility
04810 Regulation of actin cytoskeleton
108885177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108885177
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108885177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
EGF_3
DUF5050
Vgb_lyase
EGF
EGF_MSP1_1
Plasmod_Pvs28
hEGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
108885177
NCBI-ProteinID:
XP_050928569
UniProt:
A0AAJ8BB63
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All DBs
Position
LG8:complement(20310716..20327899)
Genome browser
AA seq
1139 aa
AA seq
DB search
MLAATITAALIYFMVQSSGALALGTACWDERLSRAGRNSSCVASQPFLIFGHGKAIHRLD
LDGKNQRRLVAGVGSSILLDFHFREEGVYWADKHTGVIYKATLRGAHKQKLYSSDRHISG
LAVDWIWNSVYWTSQEKGKIKRMDLNGKNERTLLRHLTQPSSVVVDPINRFLFWLSGGMT
RSIQRSDATGQMKTTLIKIAEQLKALSIDREAKRLFWVQFGLQGESAIASCDYNGNALHF
IDQPLQSQSLGISVFLEHIYYTDAASRVIKQVNKYTGGEPLDVNIKRMAKPPTDIKVVHP
LNQPQADSLSPFPGCDKQSGNCVNVCSNVAEQGVCQCSEGFALNKQGTYCEDVNECAHWN
HGCSLGCENIPGSYFCTCPKGYALLPDRKTCQEIIPCEGNMTECGQGCLTTDEGYVCVCP
EGSILQEDGQSCTGCSSADTGGCSQLCTPVTPSRWQCGCLSGYQLHQDGKRCIATGESYQ
GPPPYLLVANLVDVRRINPDGTEDQTLVEEPRGTIIALDYDPVQNNVYFASTSRKTIERI
DLNGGSRDIVVSEDLNSPEGLAIDWVHRRMYWTDKSQSAIDCSTLVGLNRETIVSKGLEK
PRGIAVHPLAKKLFWTDIGAQPVVESASLEGKARSVIASTNLVSPSGLAIDFTEDRLFWC
DQQRGLVETAALDGSDRRILLENQVGRPFDLAVFEDSLWISDREHQQLRSVHKRTGNKLQ
HIHGNMVQPASIVVVHPLAKPGADVCLHLNGGCPQVCESKLGFAHCSCLSQYILSADGKS
CLPADATNGTAESGDNESPDLTTLKGTEPALFTDKMVSDQNECYSLRCDVNAQCLLHSGS
PTCSCLEGFIGDGQLCVDIDECQLGTHNCKKNTECQNTLGKYLCKCQAGYQSNGQTCQEL
ETTSTWVTTGSPADVTTRHHNSNSVESCPSTHESYCLYEGVCFYFPEMESYACNCVSGYM
GERCQFSDLEWWELQQAEEEKRRNVVIAACMVVLISLLSIAACVTYCYGTRKFFHKQPSV
DNVSETSVTDESMSENTTTSFYMLVENGVEEKVIPAMGCPRRAVCPSCSSETGDNHVSED
SETLSQHNRGYECSMVSAVAMEITRPTVQSSPSSSSPYSCTTFKPTPLSQTTNPESPAS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgcaacgatcacagcagcgctgatctattttatggtgcaaagctcaggagcc
ttggccctcggaacagcatgctgggatgaacgcctatcaagagcggggagaaacagcagc
tgtgtggcttcacagcccttcctgatatttggccatggtaaagccattcatcggctcgac
cttgatgggaagaaccagagaaggctggtggctggtgtgggaagctctatcctactcgac
tttcatttcagagaggagggggtttactgggctgacaaacacactggggtcatctacaaa
gcaacactgagaggagctcacaaacagaaactgtactcatctgacaggcatatttcgggc
cttgcagtggactggatttggaacagtgtatactggacgagtcaagaaaagggaaaaatc
aagagaatggatttaaatgggaaaaatgagagaactcttttaagacacctgacccaacca
agctctgtagttgttgaccccattaacaggttccttttttggctgtctggtggaatgact
aggagtatccaaaggtctgatgcaacaggacagatgaaaactacacttatcaagatagcg
gagcagctgaaagcgctgtcgattgaccgagaggccaaaaggctgttctgggttcagttt
ggtctgcaaggagaaagcgccattgcctcttgtgattacaacgggaacgccctgcacttc
atagatcagccacttcagtctcagtcactggggatatcagtttttctggagcacatatac
tacactgatgctgcatctcgggttataaaacaagtaaacaagtacacaggtggagagcca
ctggatgttaacattaaacgaatggcaaaacccccaactgatatcaaggtggtacatccc
ctcaaccagccgcaggcagactccttatcaccattcccaggttgtgacaaacagagtgga
aactgtgtgaatgtgtgctccaatgtagccgagcaaggggtttgtcagtgcagtgagggc
tttgctctcaataagcaaggcacttattgtgaagatgtaaatgaatgcgctcattggaac
catggctgctctcttggctgtgaaaacatcccaggatcctatttctgtacctgtcctaaa
ggatacgcccttctaccagacaggaagacatgtcaagagatcataccatgtgaaggcaat
atgacggagtgtggccagggatgtctgacaacagatgagggctacgtctgtgtgtgccct
gaaggatctatactacaggaggatggacaatcctgtactggttgctcatctgcagacaca
gggggttgcagtcagctctgtactcctgtcacccctagtaggtggcagtgtggttgcctg
tctggctaccagctccatcaggatggcaagcgctgcattgctactggtgagtcataccag
ggaccaccaccctatctgctagttgctaatttagtagatgtacgaagaattaatcctgac
ggcactgaggatcaaaccctggtggaagagccaagaggaacaatcatagctttggactat
gacccggtccagaacaatgtgtactttgctagtacaagcaggaagacaattgagcgaatt
gatttgaatggtgggtccagagacattgttgtctctgaggatctgaactctccagaggga
ctggcgattgattgggtccaccgcaggatgtactggactgataaaagccagtcagctatt
gactgcagtaccttggttggacttaacagagaaactattgtaagtaaagggctggaaaaa
ccaagaggaatcgcggttcatcctctggcaaagaagttgttctggactgatataggtgcc
cagcctgtggtggaaagcgcttctttggaagggaaagcccgttctgtcattgcaagcact
aaccttgtgtcacctagcggcctggccatcgatttcacagaggatcgtctgttctggtgc
gaccagcagaggggtctggtagagactgctgccttggatggctcagaccgacggatcctg
ttagagaaccaagtaggtcgaccttttgaccttgcagtgtttgaagacagcctctggatc
tctgatcgggagcaccaacaactgaggagcgtacacaagcggactgggaataaactgcaa
catatccatggcaacatggtccaaccagcatccattgtggtggttcatcccctcgctaaa
ccaggggcagatgtttgccttcatctcaatggaggctgtccacaggtgtgtgaaagcaaa
ctgggattcgcccactgctcctgtctgtcacagtacatactatcagctgatggaaaaagc
tgcttgcctgctgatgctacaaatggaacagcagaatctggagacaatgaatctcctgat
ttaacaactctcaaaggcactgagccagctcttttcacagacaagatggtctcagaccag
aatgagtgttactcactccgctgtgatgtgaatgcacagtgcctgcttcattcgggcagc
cctacctgttcatgtctggaaggttttataggtgatggacagctatgtgtggatattgat
gagtgtcaactgggaacacacaattgtaagaaaaacacagaatgccaaaataccttggga
aagtatctctgcaagtgccaggctggataccagagcaatggccaaacatgtcaagagttg
gagaccacttcaacatgggtgacgactggtagccctgctgacgtcaccactcgccaccac
aacagtaactcagtggagagttgcccctctacccatgagtcctactgtctgtatgagggt
gtctgtttctactttcctgaaatggaatcttacgcttgcaattgtgtatcgggctacatg
ggggagcgctgtcaattcagtgacttggagtggtgggagcttcagcaggccgaggaagag
aagaggagaaatgtggtcattgcagcctgcatggtggtgctcatctccctgctctccatt
gctgcctgtgtcacctactgctatggaacaagaaaattcttccacaagcagccctcagtg
gataatgtgagtgagaccagcgtgacggacgagagcatgtcagaaaacaccaccaccagt
ttctacatgctggtagaaaatggtgtggaagaaaaagtcatccctgccatgggctgtccc
aggagagctgtctgtccatcatgctcttcagagacaggtgacaaccatgtgtctgaggat
tcagaaacactttcccaacacaacagagggtatgagtgttccatggtgtcggctgttgcc
atggagatcaccagacccactgtccaatcaagtccgtcatcatcaagcccatattcctgt
acaactttcaagccaacaccactttcccagactaccaacccggagtcacctgcttcctag
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