Lates calcarifer (barramundi perch): 108885261
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Entry
108885261 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor coactivator 1
KO
K09101
nuclear receptor coactivator 1 [EC:
2.3.1.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108885261
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108885261
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108885261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NCOA
Nuc_rec_co-act
SRC-1
PAS
PAS_9
PAS_3
PAS_4
PAS_13
Motif
Other DBs
NCBI-GeneID:
108885261
NCBI-ProteinID:
XP_018535034
UniProt:
A0AAJ7V3K2
LinkDB
All DBs
Position
LG7_1:complement(3802400..3849190)
Genome browser
AA seq
1504 aa
AA seq
DB search
MSAVGESPLDPATPESRKRKGSPCDTSGQSLEKRRRELECRYIEELAELLSSNMGDIASL
SVKPDKCHILKSTVDQIQQIKRREQEKAALLSPDDEVQKSDISSSSQGLVEKEALGPMLL
EALDGFFFVVNREGRIVFVSENVTSYLGYTQEELMTSSVYSILHVGDHNEFVRNLLPKSL
VNGVPWPQEPGRRNSHTFNCRMLKRPPDEVDSENLEARQQYEIMQCFTVSQPRAMQEEGD
DLQSCLICIACRIPRTQPVSSESFITKQDPTGKIISIETSALRATGRPGWEDLVRKCIYA
FFQPQGKEPSHAKKLLHEVMTHGSAISPLYHFTLSDGTPLSAQTRCKFCCPPNPDVQPFI
MGIHTIDREHNTASSQENTNPSLPPTLSSLSQTPSRSPTLPPSSNSTQGSGLAASGLHPN
NSNASSHGHNPATPTGYLTPNRTCPQQVNSPSPLSSPLTATPTSFMSPRMPRASPGLGGS
PRVPGNPFSPSTPGLHSPAGALSSGGSLNRQQSGGDSGSGGSAGSFSLSSPVPQRQPSTP
TGSSTRPPSAKPPEGGEGGGEDSVKAPLPSSSQLGTPRLNQLLDSNGAAVESNSNSIHCT
SSPHPPKPAPAPQCPASHSTLTERHKILHRLLQDSSPNDASTAAEDGVNKNEVEIKKEPP
ASPALTTAPPKSSSREPQDHQLLRFLLDTDEKDLGDLPPPSALSLQTVRVKVEKRASGEG
VPCTVSTVAAGGAAKPAGVSSSSACISPISSPVGENRRDSRKDSRDSTMSGGPVDMDPLT
QLLPGLRGPSGAKQGSEDSTTPGGGPKLQSPAPQAQPPAQLQSPVPQLQSPLSQPQSLPQ
LQSPSPQLHSPSPQLKLQSPTQLQPGEASTPRNVNVKREPPGTPNRGLSDGGPPSGCSLQ
SQSSFDFCSPPTPSQTQAQGQGDPFQTPKDSSPFPEAEVINPFSSSTGLTKMDVGDSQFQ
PLALSDTLSFDGLGTPLQAPLASPQEQCVPCTLDEVLGPPTTPEGRNDEKALLEQLVSFL
SGTDERELAELDKALGIDKLVQGGCFDPLPQNFPTQQPTASPVSMDPKLPTYSSQFTPAP
QAQFPPELATVGPQGVGFGAPRGAFPGGTAIGLRPGMTRPQGMGTQIRLPPNQLRLQLQQ
RLQAPQQLQNRLAGINPFPAGAQHVNMGIRQGIQQPQMPSQQPPLNAQMLAQRQRELYSI
QHRQRQLFQQKVMLMRQNIAGAPTGAVGPIGTARVPKGPPTTPQQQQQQQQQQQFNFPPG
YTPMTGNPPTSQSHFSPMSGGPLDNKLSGRVPLNNQTLMGGAQGQFSSTVNSSLQQGLFQ
QFGGTAMVQQDPSFPPEMSPTSPLLSPQNSTSQSPLLQQAPPPGYQSPDMKSWQQTGMSS
NSLFSQSGQSAGQAFGQQGVYNNMSITVSMAGGSGGVGSLPPMGQPVGMSNSNLSNVGSV
CSDQQVQQVQVFADVQCTVNLVGSDSYLNQGSIGATAAQKGPGPQGSQNNQAQQKSLLQQ
LLTE
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtaggggaaagccccctggaccctgccacgccagagtcacgcaagaggaag
ggctcaccatgcgacacatcagggcaaagtctggagaagcggagacgggagctggagtgc
cgctacatcgaggagctggctgagctgctgtcgtccaacatgggcgacattgccagtctc
agtgtcaagcccgacaagtgccacatcctcaagagcactgtggaccaaatccagcagatc
aaacggcgtgagcaggagaaagcagctcttctgtctccagatgacgaggtgcagaagagc
gacatctcctccagtagccaggggctggtggagaaagaggcactggggcccatgctgcta
gaggccctcgatgggtttttcttcgtcgtcaaccgggagggccgtatcgtctttgtttcg
gagaacgtgacgagttaccttggatacacccaggaagagctgatgacctcaagcgtctac
agcatcctccacgtgggagaccacaatgaatttgtacgcaatctgctgcccaaaagcctc
gtaaacggtgtaccgtggccacaggaacctggccgaaggaatagccacaccttcaactgt
cgcatgctgaagaggccgccggacgaggtggattcagaaaatctggaggctcggcagcag
tacgagatcatgcagtgtttcaccgtttcccagccacgggccatgcaggaggagggagac
gacctgcagagctgcctgatctgtatcgcctgtcggatacctcgcacccagcctgtcagc
agtgagtctttcatcacaaagcaggaccccacagggaagatcatctccatagaaactagt
gctttgcgagcgacaggccggcctggctgggaggacctggtcaggaagtgcatctacgct
ttctttcagccgcagggtaaagagccctcccacgccaagaagctgctgcatgaggtgatg
acccacggcagcgccatcagcccgctgtaccatttcacgttaagtgatggcaccccgctc
agcgctcagacccgctgcaagttctgctgcccccccaaccctgacgtacagcccttcatc
atgggcattcacactattgacagggaacacaacactgctagctctcaggaaaacactaac
cccagccttccaccgaccctcagcagcctttcccaaactccctcccgctccccgaccctc
ccccccagcagcaactcaacccaaggctcgggcctcgccgcctcgggccttcaccccaac
aacagcaacgcctcctcccacggacataacccagccacacccacaggctacctgacgccc
aatcggacgtgtccccagcaggtcaacagtccctctcctttgagcagcccactcacagcc
acccctacctcttttatgtcgcccaggatgccacgggccagccctgggttagggggaagc
cctcgggtaccggggaaccccttctctccctccacaccaggcctccattccccagccggg
gcgctgagcagtggaggcagcctcaaccggcagcagtctggtggtgatagtggcagcggt
gggtcagcggggtctttctccctgtcctctcctgtcccgcagagacaacccagtacgccc
accggctcctccactcggcctccgtcggcaaaacccccagagggaggagaaggaggggga
gaggactctgttaaagccccccttccttcttcctcacagctgggcacccccagactcaat
cagctcctggatagcaacggggcagcggttgaatcgaacagcaacagcatccactgcacc
tcatcacctcatcctccaaagcccgcccccgcccctcagtgccccgcctcccacagtact
ctaacggaacgacacaagatcctccaccggctgctccaggacagcagtcccaacgacgcc
tccaccgccgccgaggacggagtcaacaaaaacgaagtcgagatcaagaaggagccgccc
gccagtccggcactcaccacagcacctccaaagtccagctccagagagccacaggaccac
cagttactccgctttctcctggacacagacgagaaggacttgggcgacctgcctcctccg
tctgctctcagcctgcagacggttagagtaaaggtggagaagcgagccagcggggagggg
gtgccctgcacggtgtccaccgtcgcagcgggaggtgcagccaaacccgcaggagtctcc
agcagctcggcctgcatcagccccatatcgagtccagtcggggagaaccgccgagacagc
cgcaaggacagcagagactccacgatgtctggtggccctgttgacatggaccctctcacc
cagctgctgcctggcctgagaggcccaagtggggccaaacagggcagcgaggattcaaca
acccctggaggaggccccaagctccagtctccggccccccaggcccagcccccagctcag
ctccagtcccccgtgcctcagctccagtcccccctgtcccagccccagtctctcccccag
ttgcagtcgccgtcgccccagctccactccccttccccccagctcaaactgcagtcgccc
acccagctccagcccggcgaggccagcactccccgcaacgtaaatgtgaagagagagcct
cccggcactcctaacagagggctcagcgatggcggacccccgtctggttgcagcctccag
agtcagtcgtcgttcgacttctgcagtccccccactccaagccagacgcaggcccaggga
cagggagaccccttccagaccccgaaagacagcagcccctttccagaggcggaagtcatc
aacccgttcagttcaagcactggcctcaccaagatggacgtgggagactcccagttccag
cccctggctctgtctgacaccttgtctttcgatggtctcggcacccctctacaggctccg
ttggcatcaccacaagagcagtgtgtgccctgtacgctggacgaagtgctcggtcctccg
accacgcccgaaggccgaaacgacgagaaagctctcctggagcagctcgtctccttcctc
agcgggactgatgagagagaactggctgagctggacaaggccctgggcatcgacaaactg
gtacagggtggctgctttgaccctttgcctcaaaacttcccaacccagcaacccactgcc
tccccagtttccatggaccctaaactccccacctactcctcccaatttacaccagctcct
caagctcagtttcctccagagctagccacggtggggccgcagggtgtggggttcggagcc
cctcggggggctttccccggtgggacggccataggcctgaggccgggcatgacgcgaccg
caggggatgggcactcagatcaggctgccacccaaccaactgcgcctgcagctgcagcag
agactgcaggccccgcagcagctccagaacaggctggcaggcataaatccgtttcctgca
ggagcccagcacgtgaacatgggtattcgtcaggggattcaacaacctcagatgccctca
caacagcctccactgaatgcccagatgctggcccagcgtcagagggaactctacagcatc
cagcaccgccagcgccagcttttccagcagaaggtcatgctgatgagacagaacatagca
ggcgctccgaccggagccgtggggcccatcggaactgccagggtcccgaagggtcccccc
acaacgcctcaacagcagcagcagcagcagcagcagcagcagttcaacttcccgccaggg
tacaccccgatgacgggaaacccccctacctcacagagtcacttcagccccatgtccggg
ggtcctctggacaacaaactgtccggcagagttcctctgaataaccagacgctgatgggc
ggcgcgcagggccagttcagcagcaccgtgaactcctcattgcagcagggcctgtttcag
cagtttggagggactgctatggtccagcaagacccatccttccctcctgagatgagcccg
accagcccgttgttgtcacctcagaactcaacttcccagagtcctctgcttcagcaagcc
ccgcctcctggctaccagtcaccagacatgaagagctggcaacagacgggcatgagcagc
aacagcctgttcagtcagtcaggacagagtgcagggcaggcgttcggccagcagggggtt
tacaacaacatgagcatcaccgtctccatggctggaggctcgggcggcgtcggctcgtta
cctcccatggggcagccggttggcatgagcaacagtaacctcagcaacgtcggttcagtg
tgcagcgaccagcaggtgcagcaggttcaggtgtttgcggacgtccagtgcacagtgaac
ttggttggcagcgactcctacctgaatcagggctccattggcgccacggccgcccagaag
ggccccggaccgcagggctcccagaacaaccaggcccagcagaagagcctcctccagcag
ctgctcaccgagtga
DBGET
integrated database retrieval system
