Lates calcarifer (barramundi perch): 108885336
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Entry
108885336 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glycogen debranching enzyme
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00500
Starch and sucrose metabolism
lcf01100
Metabolic pathways
Module
lcf_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108885336
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
108885336
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
108885336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
CpcD
Motif
Other DBs
NCBI-GeneID:
108885336
NCBI-ProteinID:
XP_018535149
UniProt:
A0AAJ7PPJ1
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All DBs
Position
LG4:complement(23786963..23816747)
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AA seq
1536 aa
AA seq
DB search
MLPQHLKQIRVLMLNNQENLERTLFRLEQGFELQFRLGPSLQGRRVMVHTNYPLEGQQFI
RNNFRVLVWNYPTGREDDSDKFCSLDLKIAGSYQYYFGYGDTERSGGGYFVVDPVLRVGA
DNHILPLDCITIQTYLSKCLGHLDDWPDRLGVAKESGYTMIHFTPLQTLGESRSCYSLAD
QLSFNPEFSPVGQSYSWADVGALVEKLKKEWNMLCITDVVYNHTAANSVWIREHPECGYN
LVNSPHLRPAWVLDRAVWHLTTRVAEGRYKDKGLPADITNESHLNAIRSVLWQDVYPQIK
LWEFFQVKVEDAVEQFRILLRNGTKPDHSKTGGKKGLKIIQDPQYRRYGNTVDMDSALET
FVPHSSSPQHIEECCGWLRQKLNELNDEQHHIIHQHQEQAANCIVGNVVYERLADHGPKL
GPVNRKNPLVTRYFTYPYQDMTLEQEMQLLDQPDKTCHFLAHNGWVMGDDPLRNFAEPGS
NVYLRRELICWGDSVKLRYGSGPEDCPYLWAHMQKYTEITAKYFHGVRLDNCHSTPLHVA
EFMLDVARTVCPNLYVVAELFTGSEELDNIFVTKLGITSLIREAMSAGDSHEEGRLVYRY
GGEPVGAFVQPSLRPLMPSIAHAMFLDVTHDNECPIQLRSALDSLPSSAIVSMACCATGS
TRGYDELVPHQISVVKEERFYPKWNPSAPPTSTGEVGFQTGIIAGKRALNNLHQELAAQG
FIQVYVDQVDADIVAVTRHCPSTHQSVVAVCRTAFWNPKTHQYNTNVPPMFIPGKIEEVV
LEARTVERSAGKYKKDDNYINGMPEYTVEIKEHISLEESTVVKKAGVTSKGRSEFVQEIT
FQKLTPGSIIAFRVSLDPKAQTLVGVLRYYLSQFSPKYRRGSVADENPPEALQKPLAQLM
SKLTLADLNVLLFRCDAEEQEDGGGCYSIPGWETFKYAGLQGLMSVFADIRPNNDLGHPV
CSNLRQGDWLIDFVSNRLIHKEGPLAQVGEWLGAMFNYLKHIPRYLVPCYFDAILVSTYT
TALDATYKLMSSFVQNGSSFVRHLALGSVQMCGVGRFPALPPLSMKLEDVPYRISPITGQ
KEQCCVSLAAGLPHFSSGIFRCWGRDTFIALRGLMLLTGRHTEARNIILAFAGTLRHGLI
PNLLGEGRCARYNCRDAVWWWLQCIQDYATHVPNGHEILHCPVTRMYPTDDCEPCKPGEV
EQPLYDIIQEALQRHLEGISFRERNAGPKIDMNMRDEGFSVVAKADPATGFVSGGNRFNC
GTWMDKMGESERARNKGMPATPRDGAAVEIVGLSKSTVRWVVELHATGLFPYDGAKVHRD
GKELFISYSQWNQQLQQAFEAGFWVSGDPNDPNEKHPDLVHKKGIYKDSYGASSPWCDYQ
LRPNFTIAMVVAPELFTVERAWKALEVAEKKLLGPLGMKTLDPDDMVYCGVYDNALDNDN
YNLAKGFNYHQGPEWLWPVGYFLRAKLYFAKKLGEEPYARTVTLVKNVLSRHYTHLEKSP
WKGLPELTNENGQYCPFSCETQAWSLATVMEVLYDL
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgttacctcaacacctgaaacagatcagagtcctaatgctcaacaaccaggagaattta
gagcggactctgttcagacttgaacaagggtttgagctgcagttccgcctgggtccaagt
ctccagggccggagggttatggtgcacaccaactatccacttgaaggacagcagtttata
cgaaacaacttccgtgttttggtgtggaactacccaacaggaagggaggatgactccgat
aaattctgctccctggacctcaagatagctgggtcctatcagtactactttggatatgga
gacacagagagatcaggaggtggatactttgtggttgatcctgttcttcgtgttggagca
gacaaccacatcctgccattagactgcatcaccatccagacctacctgtccaagtgtctc
ggacacttagatgactggccagatagactgggagtagccaaggagtcaggatacaccatg
atccacttcactcctctgcagactctaggagagtccaggtcctgttactctttagctgac
cagctgagcttcaaccctgagttcagtccagtgggtcagagctatagctgggcagacgtg
ggggcgctggtggagaagttaaagaaagaatggaacatgctctgtattactgatgtggtg
tataatcatactgctgctaacagtgtgtggataagagaacatccagagtgtggttacaac
ctggtgaactctccccacctgcgtccagcctgggtcttagacagagctgtctggcattta
accaccagagtagcagagggacgctacaaggacaaaggacttcctgctgatattaccaat
gagagccatctgaatgccatccgtagtgtgttgtggcaagatgtgtatcctcagatcaaa
ctgtgggagttcttccaggtcaaagtggaggatgctgtggagcagttcagaatcctacta
cgtaatggtaccaagccagaccatagtaagactggagggaagaaaggcctaaagatcatc
caggacccacagtaccgtcgttatggcaacacagtggacatggactctgctctggagaca
tttgtacctcacagctcctccccacagcacattgaggagtgctgtggttggctgagacag
aaactgaatgagctgaatgacgagcagcaccacatcatccaccagcaccaggagcaggct
gccaactgcattgtgggaaacgtagtttatgagcgtctcgccgaccatggccccaaactg
ggtcctgttaataggaagaaccctctggttaccaggtatttcacctacccatatcaggac
atgactctggagcaggagatgcagctgctggaccagccagacaaaacctgtcatttcctg
gctcacaatggatgggtgatgggtgacgatccactgcgcaactttgctgagccaggctct
aatgtgtacctgcgtcgggagctgatctgctggggtgacagtgtcaaactgcgctatggc
agtggccctgaggactgtccatatctgtgggcccacatgcagaaatacactgaaatcaca
gccaagtatttccatggagtcagactggataactgccactctacaccattgcatgtagct
gagttcatgctggatgtggccagaacagtgtgtcctaacctctatgtggtggctgagctt
ttcaccggcagtgaggagttggataatatcttcgttaccaagctagggatcacatcactg
atacgagaggccatgtcagcaggtgatagccatgaagaaggccgactagtctacagatat
ggaggcgagccagtaggagcctttgttcagcccagtctccgcccacttatgccctccatc
gcccacgccatgttccttgatgtgacccatgacaacgagtgtcccatacagctgcgttca
gcgttggactctctgcccagttctgctattgtctcgatggcttgctgtgccactggctcc
accaggggatatgatgaattagtaccacatcagatctctgtggtgaaggaggaacgtttc
tacccaaagtggaacccctctgcaccccccacctccactggtgaggttggatttcagact
gggatcatagctgggaaacgggcactcaacaatctgcaccaggagctggctgcccaggga
ttcatacaggtgtatgtagaccaggttgatgcagacatcgttgcagttacccgtcactgt
cccagcacccaccagtctgtggtagcagtgtgcaggacagccttctggaaccccaaaacc
caccagtacaacaccaacgtcccacccatgttcatacctgggaagatagaggaggtggtg
ctggaggcaaggacagtggaaagatctgctgggaaatataagaaggatgataactacatc
aacggcatgccagaatacactgtggagataaaagagcatatatcgttagaggagagtacg
gtggtgaagaaagctggggtgacatctaaaggacgatctgagtttgtgcaggaaattacc
tttcagaagttgacacctggcagcatcatagccttcagggttagtttggaccccaaggcc
cagacgttggtgggggtgctgaggtattatctgtcccagttcagcccaaagtacaggaga
ggcagcgtagcagatgaaaatccaccagaagctctgcagaagcctctggcacaactgatg
tccaagctgacgctggcagatctgaatgtcctgctgtttcgctgtgacgcagaagaacaa
gaagatggtggaggctgttacagtatcccaggatgggagaccttcaaatacgctggactt
caaggtctgatgtcagtgtttgctgatatccgtcccaacaatgacctgggccatcctgtg
tgctctaacctcagacaaggagactggctgatagactttgtctctaacagactgatacac
aaagagggaccactggcacaggtgggtgagtggttgggagccatgtttaactacctgaaa
cacatcccgcgctacctcgttccctgttactttgacgccatcctggtatcaacctacacc
acagccctggatgcaacttacaaactcatgtcaagtttcgtccagaacggctccagcttt
gttcgtcacctggctctgggttcagttcagatgtgtggagttggacgcttccctgccctg
cctcccctctccatgaaattagaagacgttccctatcgcatcagtccaatcactggccag
aaggagcagtgctgtgtctcattggctgcaggtcttcctcatttctcctctgggattttc
cgttgctggggcagagacactttcatcgctctcagggggctgatgctgctcaccgggaga
cacactgaggctcgtaacatcatcctagcctttgcggggacattgcgtcacggcttgatc
cccaacctgctgggtgagggccgctgcgccagatacaactgtcgggatgctgtgtggtgg
tggctgcagtgcatccaggactacgctacccacgttcccaatggacatgaaatcctgcac
tgcccagttacgcgcatgtaccctactgatgactgtgaaccctgcaaacctggagaggtg
gagcagcctctgtatgatataatccaggaggctctgcagcggcacctggagggaatttcc
ttcagagagagaaatgctggacccaagatagacatgaatatgagagatgaagggttcagc
gtcgttgctaaggcggatccagccacaggctttgtcagtggagggaaccgctttaactgt
ggcacatggatggataaaatgggagagagtgagagagcaaggaacaaaggcatgcctgct
actcccagagatggagcagctgtggagatagttggtcttagtaagtcaactgttcgctgg
gttgtggagctccacgccacaggactgttcccctatgatggagctaaagtacacagagac
ggtaaagagctgtttatctcgtactcccagtggaaccagcagctgcagcaggcctttgaa
gcaggtttctgggtgtctggggatccaaatgaccccaatgagaaacaccccgatctggtg
cataagaagggcatctataaggacagctatggggcctccagcccctggtgtgactatcag
ctgagacccaacttcactatcgccatggtggtggctccagagctgttcacagtggagaga
gcctggaaggcactggaggtggctgagaagaaactactgggaccactgggaatgaagaca
ctcgaccctgatgacatggtatactgcggtgtctatgataatgcactggacaatgacaac
tacaacctggccaaaggtttcaactaccaccaaggaccggagtggctgtggccagtaggc
tacttcctgcgtgctaaactctactttgccaagaagctgggagaggaaccctacgccaga
acagtcaccttggttaaaaacgttctgtcacgacattacacccacctggagaagtctcca
tggaaaggtctgccagaactgaccaatgagaatggccaatactgcccattcagctgtgag
acccaggcctggtctctggccactgtgatggaggtcctctatgacctttag
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integrated database retrieval system