Lates calcarifer (barramundi perch): 108885802
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Entry
108885802 CDS
T04895
Name
(RefSeq) interferon-induced, double-stranded RNA-activated protein kinase
KO
K16195
eukaryotic translation initiation factor 2-alpha kinase 2 [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04217
Necroptosis
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108885802
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108885802
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108885802
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108885802
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108885802
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108885802
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: Other
PEK family [OT]
108885802
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108885802
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108885802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
dsrm
PK_Tyr_Ser-Thr
DND1_DSRM
DSRM_2
Kinase-like
Dicer_dsRBD
ABC1
RIO1
Motif
Other DBs
NCBI-GeneID:
108885802
NCBI-ProteinID:
XP_018535800
UniProt:
A0AAJ7PQB9
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All DBs
Position
LG16_LG22:complement(3686664..3693128)
Genome browser
AA seq
683 aa
AA seq
DB search
METGNYVAKLNEFSQKTRSTLDYEELGSAGPDHIKTFRQRVVFNGKGYPPGEGKNKKEAK
QNAAKNALTSLLGSDQESVDSTSAAETSTAPDYQTTGTSHVNYICWLNEYGQKNRLSIRA
VESTKPGLNNAVQCCSFVVGDKEYPAVSGKTRREAKEEAAKLVYDVICGSKTTETADLQD
EELNQSISDICNKTGGLSLNNSFTETNYIGIVNHYCQKKRLSHTFIEVRSCGPPHNRQFF
YKLVIDNKEYPEGEGKTVKEAKQSAAQLAWSALQEQSDWDSKVSFRSTASEDGAPHISAP
SATMDSSESSSQSVPMSTSDSIMFIDSSNPSQAQVSFRSTMSENDTTSSLSDPSSQSMPM
GASDQAAVKTKSMGNGVTTTQSRFISDFDCIERLGKGGFGHVYKAREILVDKYYAIKVVR
GKKKALREVTALSDLQHENIVRYYNCWMEDSEYKQDCSEDSSSSSQSISNSSPQYLYIKM
ELCDTKTLKDWITEMNKITLQHSKRREQSLNIAQQIVSGVEYIHSKKLIHRDLKPANIMF
GREREVKIGDFGLVTAQVDDDDDENLMERTNKTGTPSYMAPEQKSERNYDEKVDIFALGL
IYFELLWKLSTGHERVVIWKDARSQKLPEKFSLTFSHENRIIKSLLCVKPEDRPKARKLK
TELEKWAQTLNAQKNMQQQNVTV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggaaactacgtggctaaactaaacgagttttcacagaaaacacgctcgacg
ctggactatgaagagcttggctctgccggacctgatcacattaaaacattcaggcagagg
gtagtctttaatggcaaaggctaccctcctggtgaggggaagaacaagaaggaagccaag
caaaatgctgctaaaaatgcactgacaagcttgttgggcagcgaccaggagtcagttgac
tcgacaagtgcagcagaaacttccactgcaccagattatcagacgacaggtaccagtcac
gtcaactacatctgttggctgaatgaatatggtcagaagaacaggctgagtataagggct
gtggagtcaaccaaaccagggttaaataatgctgttcaatgctgtagctttgtggttggt
gataaggagtacccagctgtctctggaaaaacaaggcgagaagccaaggaggaagcagcc
aagcttgtatatgatgtgatatgtggcagtaaaaccacagagactgcagatctgcaagat
gaggaattaaatcaaagcatttctgatatctgcaacaaaacagggggcctgagtttgaac
aacagctttacagagacaaattacatcggaatcgtcaaccactactgtcagaaaaaaagg
ctctcccatacatttattgaagtgaggagctgtggcccacctcacaaccgtcaattcttc
tacaaattagtgattgacaacaaggaataccctgagggtgagggtaagactgtcaaggaa
gccaaacaaagtgcagctcagctggcctggtctgctcttcaagaacagtctgactgggac
agtaaggtgtcattcaggtcaacagcgtccgaagatggtgcaccacatatctcagcgcca
tcagctacaatggattccagtgaatcatcatcgcaaagcgtgccaatgagtacaagtgac
tcgataatgttcatagattcatcaaacccttcccaggctcaggtgtccttcaggtcaacc
atgtctgaaaatgatacaacatccagtttgtctgacccatcgtcacaaagcatgccaatg
ggtgcaagtgatcaggctgctgtcaaaaccaagagtatggggaacggcgtgacaacaacc
cagtcaagatttatatcagactttgattgcatagagcgtcttggcaaaggaggctttggt
catgtttacaaagcaagagaaatactggtcgacaagtattacgccatcaaagttgtccgt
ggtaaaaaaaaagctctgcgagaggtgacagcactatcagaccttcaacatgagaacatt
gttcgatactacaactgttggatggaagattcagaatacaaacaggactgttcagaagac
agttccagctcttctcagtcgatcagtaattcatcaccacagtacctctacattaagatg
gaattatgtgacaccaaaacactcaaagactggataactgagatgaacaagataactctg
caacactccaagagaagagaacaaagtctaaacattgctcaacaaatagtcagtggagtc
gagtacattcactccaaaaaattaatccacagagaccttaagcctgccaacatcatgttt
ggacgggagagagaagtgaagattggggactttggtctggtcactgctcaggttgatgac
gatgatgatgaaaacctgatggaaagaacaaacaaaacaggaaccccatcttacatggct
cctgagcagaagagtgagaggaactatgacgaaaaagtggacatatttgcattggggctg
atatactttgaactcctttggaaactctccactggccatgaaagagtagtgatttggaag
gatgccagaagtcagaagttgcctgaaaagttttcattgaccttttcccatgagaatcgt
atcattaagtcattgctgtgtgtgaagccagaggaccgacccaaagcacgtaaactgaag
acagagctagaaaagtgggctcagacactcaatgcacaaaaaaatatgcagcagcaaaat
gtaactgtctga
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