Lates calcarifer (barramundi perch): 108886088
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Entry
108886088 CDS
T04895
Name
(RefSeq) alpha-N-acetylgalactosaminidase isoform X1
KO
K01204
alpha-N-acetylgalactosaminidase [EC:
3.2.1.49
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00603
Glycosphingolipid biosynthesis - globo and isoglobo series
lcf01100
Metabolic pathways
lcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108886088
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108886088
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.49 alpha-N-acetylgalactosaminidase
108886088
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Gene cluster
GFIT
Motif
Pfam:
Melibiase_2
Melibiase_2_C
Melibiase_C
Melibiase
Glyco_hydro_97
Motif
Other DBs
NCBI-GeneID:
108886088
NCBI-ProteinID:
XP_018536237
UniProt:
A0A4W6C9M7
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Position
LG15:complement(13949881..13959143)
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AA seq
423 aa
AA seq
DB search
MHPLSVTLFLVLVSLTVTLDNGLLRTPPMGWMAWERFRCDLDCHDDPENCISEDLFRDMA
DRMAEDGWKELGYEYIIIDDCWMSMLRDEQGRLQPEPSRFPGGIAKLARYIHDRGLKLGI
YADMGTHTCMGFPGTTLEKIEIDAQTFASWGVDYLKFDGCYSNPIEQMLGYPLMSKALNA
TGRPIAYSCSWPAYLGGLPPNVNYSLLGDICHLWRNYYDIQDSWDSVQGIIEWFSNNQDD
LQPAAGPGRWNDPDMLIIGNFGLSVDQAHSQMALWAIMAAPLIMSNDLRNLDNSARAILQ
NKVAIAINQDPIGVQGRRLLQEKSHIEVYWRPLSQSASCLVFLSRRTDMPHLYHTSLAKL
NYEAGNYQAYDVFTGSKLTGLNAKTEFTVSINPSGVVMWYVYPEQRTLHSQHNKPEPEHH
IVL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccttatcagtgactctgttcctggtcctggtctctctgactgtgactctggac
aatggactgctgaggactccacctatgggatggatggcttgggaacgctttcgctgtgac
cttgactgtcatgatgacccagagaactgcatcagtgaagatctgttcagagacatggct
gaccggatggctgaggacggctggaaggagctgggttatgaatatataatcatagacgac
tgctggatgtccatgctgagagatgaacaaggaaggctgcagcctgaaccctccaggttc
ccagggggcattgcaaaactggcaaggtacatccatgaccgtggtctgaagctgggcatc
tatgcagacatgggcactcacacgtgtatgggattccctggcaccacgctagagaaaatc
gagattgatgcccagacctttgccagctggggagtagactatctaaagtttgatggctgt
tactctaatcctatagaacaaatgttgggttaccctctgatgtccaaggctttgaatgct
acaggcagaccaatagcctactcctgtagttggcctgcctatctcggaggacttccacct
aatgtgaactactctctgctgggggatatttgtcacttgtggaggaattactatgacatc
caggactcatgggacagtgtgcagggcatcatagagtggttctcaaataaccaggatgat
ttgcagccagctgcggggcctggacgatggaatgaccctgacatgctcatcattggaaac
tttggtctcagtgtggaccaggctcactctcagatggctctgtgggccataatggctgct
cctctcatcatgtccaatgaccttcgaaacctggacaacagcgccagggccatcctgcaa
aacaaagtggccatcgcaatcaaccaggaccctattggtgtccagggaagacgcctgctg
caggagaagagccatattgaggtgtactggaggcctttgtctcaatcagccagctgcctg
gtgttcctgagcagacggacagacatgccccacctctaccacacctccctggctaaactc
aactatgaagctggcaactatcaggcctatgatgtgtttactggctcgaaattgacgggg
ttgaatgccaagacagagtttacagtctccatcaatccgtcaggtgtggtcatgtggtat
gtttacccagaacagcggacactccactcccagcacaacaaaccagaacctgaacatcat
atagtgttatga
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