Lates calcarifer (barramundi perch): 108886302
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Entry
108886302 CDS
T04895
Name
(RefSeq) DNA nucleotidylexotransferase isoform X1
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108886302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108886302
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
108886302
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108886302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
DNA_pol_B_palm
NTP_transf_2
BRCT
HHH_5
Motif
Other DBs
NCBI-GeneID:
108886302
NCBI-ProteinID:
XP_018536606
UniProt:
A0AAJ7PRE2
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Position
LG16_LG22:complement(1231801..1301756)
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AA seq
500 aa
AA seq
DB search
MFHSPILPRVRKRPRPAEAGIPRREEVKFDDVRLYLVERKMGRSRRSFLTQLARSKGFIV
EDILSDVVTHIVSEDSQASSLWTWLKGCDLRNLTSMLVLDISWFTDSMREGRPVAVETRH
LIQDTLPTVPEGSTPTPVTTVSQYACQRRTTIENSNKIFTDAFEVLADSYEFSEIEGSCL
AFRRAASVLKSLPCVVRCLGDTEDLPCLGDHTKAVMEEILQYGRSFEVEKILSDERFQTL
KLFTSVFGVGPKTAEKWYRRGLRSFSDILTEPDIHLNRMQQTGFLHYEDISRAVSKAEAR
ALGNIIDEAVHAITLDAMIALTGGFRRGKEFGHDVDFIVTTPELDRERTLLPDIIDRLEQ
QGILLYCDYQASTFDITKLPSHRFEAMDHFAKCFLILRLEGSKVEGGLNCAEEDRRGWRA
VRVDLVLPPMDRYAFALLGWTGSRQFERDLRRFARSERRMLLDNHALYDKTKNEFLAATT
EKDIFAHLGLEYIEPWQRNA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgttccactctcccattctgcctcgtgtgaggaaaaggccgagacccgcagaagctggt
attcccagacgtgaagaggtgaaatttgacgatgtcaggctgtacctggtggagaggaaa
atgggccgcagcaggagaagctttctgacccagctggccaggtcgaagggctttattgtg
gaagacatcctcagcgacgtggtcactcacattgtgtcggaggacagccaggcttcatcg
ctgtggacgtggcttaagggctgcgatctgaggaatctaaccagcatgctcgtgctggac
atcagctggttcactgacagcatgagagaggggagacctgttgctgtggagaccagacat
ctcattcaggacaccttgcccacagtgccagaaggttctacacccactcctgtgaccaca
gtttctcaatatgcctgccagagacggaccaccatcgaaaacagcaacaagattttcaca
gatgcgtttgaagtgctggcggacagctatgaattcagtgagattgaaggttcatgcctg
gccttcaggagagctgcttctgtcctgaagagtctgccctgtgtggttcggtgtctgggg
gacactgaggatctgccctgcctgggggaccatactaaggcagtcatggaggagatcctt
caatatggccgctcgtttgaagtcgagaaaatactctctgatgaaaggtttcaaacacta
aagctgttcacaagtgtgtttggggttggacctaagacggctgagaagtggtaccgcaga
gggctgcgctcattcagcgacattctgacggagcccgacattcatctaaaccggatgcaa
caaactggttttctgcattatgaagacatctccagggctgtcagtaaagcagaggcccga
gccctggggaacattattgacgaagctgtccatgccatcacactggacgccatgatagca
ctgacaggtggctttcgaagggggaaggagtttggtcatgatgtggactttatcgtgacc
acgccggagctggacagggagaggactctgctaccagacattattgacagactggaacag
caaggcatcttgctctactgtgactaccaggcctccacctttgatataaccaagcttccc
agccacaggtttgaggccatggaccactttgcaaagtgcttcttgatcctgcggctggag
ggaagcaaagtggagggaggtctcaactgtgccgaggaggacagaaggggctggagggcg
gtgcgcgtggacttggtgttgccgccaatggatcgttacgccttcgccctcctgggctgg
accggctccaggcagtttgagagagacctgaggaggtttgctcgatcagagagaaggatg
cttttggacaatcacgccctgtacgacaaaaccaagaacgagttcctggcagccacgact
gaaaaggacatctttgcccatctgggtctcgagtacatcgagccttggcagagaaatgcg
tag
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