KEGG   Lates calcarifer (barramundi perch): 108886893
Entry
108886893         CDS       T04895                                 
Name
(RefSeq) C-X-C chemokine receptor type 4
  KO
K04189  C-X-C chemokine receptor type 4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03250  Viral life cycle - HIV-1
lcf03260  Virion - Human immunodeficiency virus
lcf04020  Calcium signaling pathway
lcf04060  Cytokine-cytokine receptor interaction
lcf04144  Endocytosis
lcf04672  Intestinal immune network for IgA production
lcf04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108886893
   03260 Virion - Human immunodeficiency virus
    108886893
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    108886893
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    108886893
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108886893
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108886893
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    108886893
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:lcf04030]
    108886893
   04050 Cytokine receptors [BR:lcf04050]
    108886893
   04090 CD molecules [BR:lcf04090]
    108886893
G protein-coupled receptors [BR:lcf04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    108886893
Cytokine receptors [BR:lcf04050]
 Chemokine receptors
  CXC Chemokine
   108886893
CD molecules [BR:lcf04090]
 Proteins
  108886893
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx CXCR4_N COX2_TM SFXNs YobI-ATPase
Other DBs
NCBI-GeneID: 108886893
NCBI-ProteinID: XP_018537525
UniProt: A0A4W6DG65
LinkDB
Position
LG1:12202681..12204835
AA seq 407 aa
MLPSQQTDQPASQAKAHTLVLTLHFQRVVEDMEFDLSIELFDNITDNITEESGDFGLEFQ
EPCGSALSSEFNKVFLPTVYGIIFILGTIGNGLVVVVMGYQKKVKTMTDKYRLHLSVADL
LFVLTLPFWAVDAAKHWYFGSFLCVSVHMIYTVNLYSSVLILAFISLDRYLAVVRATNSQ
ATRKLLASRVIYLGVWLPAAILTVPDMVFARVQDTESSKYLFTDESMKTADPKTICQRIY
PEESSLIWTVVFRFQHILVGFILPGLVILICYCIIIAKLSQGAKAQALKKKALKTTVILI
LCFFTCWLPYCVGIFLDNLIMLNVVPTSCELQQAVEKWISITEALAYFHCCLNPILYAFL
GVKFKKTARSALTVSSKSSQKVTLMTKKRGPISSVSTESESSSVLSS
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgttgcccagtcaacaaactgatcaacctgcttcacaggcaaaggcacacacgctggtc
ttaacgttacattttcaacgagtggtggaagacatggagtttgacctttcaattgagctg
tttgacaacatcactgacaacatcacagaggagtccggagacttcggtctggagttccag
gagccatgtggcagtgcgctgagcagcgaattcaacaaggtcttcctaccgacggtttac
ggaataatattcattctagggaccattggcaatggattagtcgttgttgtcatgggctac
cagaaaaaagtcaaaactatgacggacaagtaccggctccatctctctgtggctgatctc
ctgttcgtcctcacgctgcccttctgggccgtggatgcagccaagcactggtacttcgga
agtttcctatgtgtgtcagtgcacatgatctacacagtcaacctgtacagcagcgtgttg
atcctggccttcatcagtctagacaggtacttggcagtcgtgcgggccactaacagccaa
gccacaagaaagctgcttgcaagcagagtgatctatctgggtgtgtggctgcctgcagcc
atactgactgtacctgacatggtatttgccagggtgcaagacacagagtcttcaaaatac
ctctttacagatgagagcatgaagactgcagaccccaagaccatctgccagcgcatctac
ccggaggagagcagtctcatatggacagttgttttccgcttccaacacatcctggtgggc
ttcatcctgcccggtttggtcatcctcatctgctactgcatcattattgccaagctgtcg
caaggcgccaaggcccaggcgctgaagaagaaagctctcaaaaccacggtcatcctcatc
ctgtgttttttcacttgctggctgccctactgtgttggcatctttttggacaatctcata
atgctgaatgtggtccctacatcctgtgaactgcaacaggcagtggagaagtggatttct
atcactgaggcgctggcttattttcactgctgcctaaaccccatcctctatgctttcctg
ggagttaagtttaagaaaacagccaggagcgcactgacagtcagcagcaaatcaagtcag
aaagtgactctcatgactaaaaagcgagggccaatttcatccgtgtcaactgagtcagag
tcttcaagtgttttgtcaagttaa

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