Lates calcarifer (barramundi perch): 108886968
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Entry
108886968 CDS
T04895
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108886968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108886968
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108886968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108886968
NCBI-ProteinID:
XP_018537647
UniProt:
A0AAJ7PSS5
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All DBs
Position
LG3:20919937..20935213
Genome browser
AA seq
916 aa
AA seq
DB search
METDGEQNQQGASTNGSAASGTSSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLM
LQQQINNAQLQNLAAVQQATLAASRQSSPSSSSSSQTTSTTAASVTSGAGSTTSSRPMGA
SATSTISQSVLLSGTAGGQGQMYLRVNRSLRAPISSQLIFMPGSTATAAVATVTQQPQAQ
QQQQEVTPTSSSSSQSDNDQVQNLAMRGVSSPKGVGVKTEAPERSDSAAYSLVQPSHQPN
SQSPTKPSQPQPQPPHIKIPTYPQPTNLKAHPSSSSGASSSSSSSTSSIPLSQLLLHGTR
TLTTGTTAPTAAHTLVLTSNAASQPHGYPVGTATIKPAVNAQTLVVQPLQKTSLSTEKSG
HGNGPIPIQPKTLQGLRLPLQLPSRNPPPILPAPPPASSSAQPAQPPQPPHIPVQIVGAR
QSTLGNAQALALARGSCSQDGAAVLTSSSSLLTMVASIASREGGVVGRGVGLKALQSPQE
APPLAQVSQVHPQANQSSGQNQNGSLASSTASSQSPTVSSPPSSLSRSTLSLPLATEEQR
GASAGVTTNGDSLGNQTPQGKQMTVSLKRKSDSNSANDEDGPSPPRIQPVRDHTSVLTTN
PTEAGSGPPPPAPPSPSPVLTVSRGVCGQGERAPPPQAVVKPHVLTHLIEGFVIQEGAEP
FPVCGPVKDSAGEDLTNDSPDTNQSETVTTATVLKCEYCKNFAPASQFRGTKRFCSMSCA
KSMYWFPRYNVSFRQHFCVRQGHSQGQGQDHAPDQNQGQGHLSNSDEEGGIARRRVPRRT
SSEIASAKIAGRPIPVKCRSESSHSDEESSGEEDEDDPMSLSPASSASCHQPPPPLPTES
SAPSCLPAAPAQWSVEEVSQFISSLQGCEELASQFLSQEIDGQALLLLKEEHLMSTMNIK
LGPALKICAHINNLRD
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatggagagcagaaccagcagggggcctcgaccaatgggagcgctgcgtcc
gggaccagctcccgcccctctcccatgaactccatgtctctgtatgaaagacaggcagtg
caggccctgcaggcgttacagaggcagcccaatgctgctcagtacttccagcagctgatg
ctgcaacagcagatcaacaacgcccagctgcagaacctggccgctgtgcaacaggctaca
ctggctgcaagtcgtcagtcaagtccttccagcagcagctcgtctcagaccaccagcacc
accgctgccagtgtaacatctggagcaggatccacaaccagcagccgtcctatgggtgcc
tcggcaacttccacaatcagccaatcggtgcttctgagtgggacggcaggaggacaggga
caaatgtacctgagggtcaaccgctccctgagagcccccatctcctcacagctcatcttt
atgcccggcagcacggcaaccgctgctgtggcaactgtcacccagcagccacaggctcag
caacagcagcaagaggtgactccaacttcctcttccagcagccaatcagacaatgaccag
gtgcagaatctagccatgcgaggtgtgtccagtcccaaaggtgtgggtgttaagactgaa
gccccggagaggagtgactcggcggcctactccctggtccagccctcccaccagccaaac
tcccagtctcccactaagccaagccagcctcagccccagcccccccacatcaaaatcccc
acgtatccccagcccaccaacctcaaagcccacccctcctcttcctctggtgcctcctcc
tcctcctcttcctccacctcttccatccctctctcccagctcctgctccatggaacccgg
accctcaccacaggaaccacagctcccacagcagcacacaccctggtcctaacgtccaat
gcggcatctcagcctcatgggtacccagttggcacagcgaccatcaaaccagcggtcaac
gctcagactctggtggtgcagcctctgcagaagacctcactcagcacagagaaatcgggc
cacggtaacggacccatccccatccagcctaaaactctgcaggggctccgtctgcccctc
cagctgccttctaggaacccccctcccatcctgcctgccccaccaccagccagcagctct
gcccagcctgcccagcctccccagccgccgcacatcccagtccagatcgtgggggccagg
cagagcaccctgggaaacgcccaggctctggctctggcccggggcagctgcagccaggac
ggagccgccgtcctcaccagctcatccagcctgctcaccatggtggcttccatcgcttcc
agggagggtggggtcgtgggccgcggagtggggctaaaggcgcttcagtcgccccaggag
gctcccccgttggctcaggtctctcaagtgcatccgcaggccaatcaaagctctggacag
aatcagaacggatccctagcctcaagcaccgcctcgtcccagtcccccaccgtttcctct
cctccctcttcgctgtctcgttccaccctctccctccccctggcaactgaagagcagaga
ggagcgtcggctggtgtgaccaccaatggagactcattgggaaaccagacaccacaggga
aagcagatgactgtctcactaaaaaggaaatcagactcaaattcagccaatgatgaagat
ggcccctcccccccacggatccagcccgtcagagatcacacctctgtgctcacaaccaat
cctactgaagcaggatctgggcctcctcctcccgccccgccctctccctccccagtcttg
acggtgtcccgtggggtatgcggtcaaggggagagagctcctccccctcaagccgtggtt
aaacctcacgtccttacacaccttatagagggcttcgtcatccaggaaggggcagagcct
ttccccgtatgtggtccagtaaaggactcggctggtgaggatttaacaaacgacagtccg
gacaccaaccaatcagagactgttaccactgcaacagtgcttaagtgtgagtactgtaaa
aactttgctcctgccagccagttcagaggcaccaaaaggttctgctccatgtcttgtgcc
aagagtatgtattggttccccaggtacaacgtcagcttcaggcagcacttctgcgtgcgg
cagggtcacagccagggtcaaggtcaggatcacgctccagatcagaatcaaggccaaggt
cacctctccaactcagatgaggagggaggaattgccaggcgaagggttccccgcaggacc
agctcagaaatagccagtgccaagatagcagggagacccatacctgtcaagtgccgttca
gagtccagccactcagacgaggagtccagtggagaggaggacgaagacgaccccatgtcc
ctctcgccagcctcctcggcatcctgccaccagccgccgcctcctctccccacggagagt
tctgcacccagctgcctgcctgctgcccccgcccagtggagtgtggaggaagtgtcgcag
tttatttcctcgctgcaaggctgtgaggagctcgcctcccagttcctgtcgcaggagatt
gacggacaggccctgctgctgctgaaggaggagcatctcatgtccaccatgaacatcaag
ctgggtcccgccctcaagatctgtgcccacattaataatctgagagactga
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