KEGG   Lates calcarifer (barramundi perch): 108887178
Entry
108887178         CDS       T04895                                 
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
  KO
K04359  platelet-derived growth factor subunit A
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04010  MAPK signaling pathway
lcf04020  Calcium signaling pathway
lcf04510  Focal adhesion
lcf04540  Gap junction
lcf04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108887178
   04020 Calcium signaling pathway
    108887178
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108887178
   04540 Gap junction
    108887178
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108887178
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:lcf04052]
    108887178
   00536 Glycosaminoglycan binding proteins [BR:lcf00536]
    108887178
Cytokines and neuropeptides [BR:lcf04052]
 Cytokines
  Growth factors (RTK binding)
   108887178
Glycosaminoglycan binding proteins [BR:lcf00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   108887178
SSDB
Motif
Pfam: PDGF_N PDGF TraY
Other DBs
NCBI-GeneID: 108887178
NCBI-ProteinID: XP_018537967
UniProt: A0AAJ8B6T3
LinkDB
Position
LG5:4416645..4464906
AA seq 242 aa
MNNMNLTTKSHFSLKAGGSTGPRERQAMEERGKKRGEQNEWDASEEKLLPGGSDSVTARV
SPFKESPLPRELLERLSRSDIRSISDLQRLLEIDSVENEVIVETKHSYHKDFSHSFPDLK
RAHTHTRHRRSTVVEEALPAVCKVRTTIYEIPRSQVDPTSANFIIWPPCVEVKRCTGCCN
TSNMRCQAARKHHRMVKVAKVEYVRRRPKLKEVQVRLEDHLECMCTSKRHISPNSDTDNG
IR
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaacaacatgaatctgacaaccaagtcacacttcagcttaaaggcagggggctcgact
ggccccagagaaagacaagcaatggaagagaggggaaaaaaaagaggagaacagaacgag
tgggatgcatcagaggagaagctgctgccaggaggaagtgacagcgtcacggcacgagtg
tcgccattcaaggagtcccccctcccacgggagctgttggagcggctctcccgcagcgac
atccgcagcatcagcgacctccagcggctgctagagatagactccgtagagaacgaggtg
atcgtagagaccaaacacagctaccacaaggacttctctcacagcttccccgacctgaag
agagcacacacacacaccagacacaggaggagcactgtggtggaagaggccttgccagcg
gtgtgtaaggtgcggacaacgatctatgagatccccaggagccaggtggaccccacctcg
gccaacttcatcatctggccgccgtgcgtcgaggtgaaacgctgcactggctgctgcaac
accagcaacatgaggtgccaggcagcccgcaagcaccaccgcatggtcaaggtggcgaag
gtggagtacgtgcggcggcggcccaagctgaaggaggtgcaggtgaggctggaggatcac
ctggagtgcatgtgcactagcaaacgccacatcagcccaaactcagacacggataatggc
atcaggtga

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