Lates calcarifer (barramundi perch): 108887333
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Entry
108887333 CDS
T04895
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108887333 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108887333 (phc1)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108887333 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108887333
NCBI-ProteinID:
XP_018538218
UniProt:
A0AAJ7PTG1
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Position
LG15:complement(10424305..10430647)
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AA seq
807 aa
AA seq
DB search
MDAGEDQNTGTNNGNPQTSGNSRAPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQLHNLAAVQQATLAASRQSNTPSNSMSQAPTTVNLSTTSAGGTMTNPRPHGPAT
SATTPTLNQSVLLGGNSAGQGQMYLRVNRSLRTPLASQLIFMPGGTATATVATVAQTQPQ
PQPQPQQQQQQQQQQQQQQQHEVAPTTTSAQSDNDQVQNLALHCASTPRAVAVKSELPER
KDAASFPLGQQQQTFPQAAQQQQVQPQQQQQMAKANFTQQSTTNTMTVKTGNQAMTVTPA
ASVAPSSTSSTALPLSQLLLSPSAAPVILVPTSNVPTSTQGYPIGSVAPKPNVNTQTLVV
QPLQQASTTADKGPVPIQPKTAQGHRLPVQLPPRHPPPILPAPPSQAATGGHNPPHIPVQ
LVGARQGLTGNTQAVALAQARSSTAQENAAGGNVNAVSNNSAMQTKPAIGSLKRKSDCDA
PNEMLTESSDSAPMKDSAPPLSPAPTKDSAPPAAAAFSSPPTLSLPLPLSRVGHGDKDRA
PVPQAVVKPQVLTHLIEGFVIQEGAEPFPVAGLLKDRDFALVGRSENGPPLLKCEYCGSL
APASQFRGSKRFCSNTCAKRYNVSCSQHFKTSRGRSGAGLTSPPAPTESAARRRGPSRRN
SSNIACNKMSNRHLPVKCHSESSRSEDVSSDGEEEEEEDSPSLSPSSSHSCSRADHSAPQ
SDSSAPGSLPLEGANFLSATPAQWSVEEVCRFISSLQGCEELAAQFLSQEIDGQALLLLR
EDHLISTMNIKLGPALKICASINSLRE
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgaagaccaaaacaccggcaccaacaatggaaatcctcagacaagtggg
aactcccgtgcacctcagatagcccacatgtccctatatgagcgacaggctgtgcaggct
ctccaagcactacagagacagccaaatgcagctcagtacttccagcagctcatgctgcag
cagcagatcaatagtgcccaactccataacttggccgctgtgcaacaggccacccttgcg
gctagtcgccagtccaataccccgagtaacagcatgtcccaggcgcccaccactgtcaac
ctaagcaccacatcagcaggagggacaatgactaatccccggcctcacggcccagccacc
tctgcaacgactccaactctcaatcagtcagtgttgctgggcggaaactcagcaggacag
ggacagatgtatcttagggtcaaccgctctctcaggactccgcttgcttctcagctcatc
ttcatgcctggtggtacagcaacagctactgtagcaacagttgcccagacacagcctcag
cctcagcctcagccgcagcagcagcagcagcagcaacaacaacaacagcaacagcaacag
catgaagttgctcctaccactaccagtgcccagtctgacaatgatcaggtgcagaatctg
gccctacactgcgcttccactcccagagcagttgctgtcaagtctgagcttccagagagg
aaagatgctgccagctttcctctcggtcagcagcaacagaccttcccccaggcagctcag
caacagcaagtacagccacaacagcagcaacaaatggccaaagccaacttcactcagcag
tccaccaccaacactatgactgtaaaaactggaaaccaggccatgactgttactcctgct
gcttctgtagctccctcctccacctcttctacagcactccctctctcccaactccttctg
tccccctctgctgcccctgtgatcttggtgcccacctccaatgttcctacctccacccag
ggctaccccattggctcagtggccccgaaacccaatgtcaacacgcagactctggtggtg
cagccactacaacaggccagcactactgcagacaaaggccctgtgcctatccaacccaag
acagctcagggacaccgtttacctgtgcagctgcctcctagacacccacctcccattctc
ccagcaccacccagccaggccgccactgggggacacaaccctccccacatccctgtgcag
ctcgtgggagccaggcagggcttaacaggaaacacacaggctgtggccctggcacaggct
cgaagcagcacagcccaggaaaatgcagctggtgggaatgttaatgcagtctctaacaac
agtgctatgcagacaaagcctgccattggctctttgaagagaaaatctgactgtgacgca
ccaaatgagatgttgacagaatcttcagactctgcaccaatgaaagattctgctcctccc
ttatcccctgcccctacaaaggactcagctcctcctgcagctgctgcattctcatctcct
cccaccctgtccttacctctgcccttgtcaagagtcgggcatggggacaaggacagagcg
cctgttccccaggcagtggtcaaacctcaagttctcacccacctcatagagggttttgtt
atccaggagggagctgaacccttccccgttgctggactcctcaaagacagagattttgct
ctggtcggccgctcggaaaatgggcctccgttgttgaagtgtgaatactgtggaagcctc
gctccagccagccagttcagaggatcaaagaggttctgttcaaatacctgtgctaagagg
tataatgtaagttgcagccagcacttcaagacaagcagagggagaagtggtgcagggctc
acatcacctccagcacccactgagagcgctgccaggcgccggggcccctctcgcaggaac
agctctaatatcgcctgtaataaaatgtcaaacaggcatctacctgtcaaatgtcactct
gaatccagtcgctcggaggatgtgtccagcgatggggaagaagaggaggaggaggattct
ccttcactttccccaagctcttcacactcctgctccagagctgaccacagcgctcctcag
tctgacagctcagctcccggtagcctcccactggagggtgctaactttctctcagcgact
cctgctcagtggagtgtggaagaagtctgcaggtttatctcttcacttcaaggttgtgaa
gagctggctgcccagtttctctcacaggaaatagatgggcaggctctgctgcttctgcga
gaggaccatctcatctccaccatgaatatcaagctgggtcctgctctcaagatatgtgcc
tccattaacagcctgcgtgagtga
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