Lates calcarifer (barramundi perch): 108887339
Help
Entry
108887339 CDS
T04895
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108887339
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108887339
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108887339
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108887339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_NXF1-5
LRR_14
LRR_8
F-box_4
Adeno_E3_CR2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
108887339
NCBI-ProteinID:
XP_018538240
UniProt:
A0A4W6E5M3
LinkDB
All DBs
Position
LG15:29905070..29922762
Genome browser
AA seq
613 aa
AA seq
DB search
MLTLLSMFYYICLRRRSRSGTRGEALTSRRAVESGQRAVLPVSVEVEQYAKEVLDFSSHY
GSENSMSYTMWNLAGVPNVYPSSGDFTQTAVFRAYGTWWEQCASAPPPFRRTPKGFHSQD
YIELGFEEPVYPTAVEVLETYYPGAIVQILACSHNPFSQNPPTDVRWEVLWSGEPTKALT
PQARQFSPTIKHISFPTNLLRLEVNSSLLDYYTELDAVILRGVKERPMLALYKMPVIDIS
DLSDSEEELSDLGGPFRQGGDSKHQRTGNGYFDKLPYELIQLILSHLTLPDLCRLAQSCK
LLHQHCCDPLQYTQLSLQPYWARLTDASLGHLQSRCTLLQRLNLSWTGSRGALTLTGFSS
FMKACGLSLVCLELSCCHFLNEACLEVISQTCPELQELNLSSCDRLHPQAFTHISKLTRL
RRLVLYRTKIEQTAILSILTFCIELRHLNLGSCVRIEDYDVVASMLAARCRSLCSLDLWR
CRNLTDRGLAELVSGCRMLEELDLGWCPTLQSSTGCFQHLARSLPRLRKLFLTANRTVCD
SDIEELAASCPSLQHLDILGTRLVSAASLKKLLQSCPQLLLLDVSFCSQIDMRVVQELCG
FFPNVAIKKSFTQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttaacccttttgagcatgttttactatatctgtctgcggcgacgctccaggagtggg
actcgaggcgaggctctgactagtcgacgggctgtggagtcgggccagcgggcggtgctg
ccggtcagtgtggaagtggagcagtatgcaaaggaggttctggacttcagctcccactat
ggcagtgagaatagcatgtcctacactatgtggaacctggctggggtacccaatgtgtac
cccagctcgggggacttcacccagacggctgtattcagagcttatgggacatggtgggaa
cagtgtgccagtgctccaccacctttccgccgcacccctaaaggcttccacagccaggat
tatattgaactgggctttgaagagcctgtctatcctacagcagtggaggtgcttgagact
tattaccctggagccatcgtccagatcctggcctgctctcacaaccccttctcccagaac
ccacccactgatgtcaggtgggaggtgctgtggtcaggggagcccactaaggcactgaca
ccccaggcacgccagttttcccctaccatcaaacatatcagcttccccaccaacctgctg
cgtctggaggtcaacagctccttgctggattactacacagagctggatgccgttattctc
cgtggggtaaaagagaggcccatgctggccctttacaagatgcctgtcattgacattagt
gacctgagtgacagtgaggaggagctgtctgatttgggcggccctttcaggcaaggagga
gacagcaagcaccagaggacaggaaatggctactttgacaagctgccctatgagctcatc
cagctgattctgagccacctgaccctgccagacctctgccgtctggcccagagctgtaag
ctgctgcaccagcactgctgcgacccgctgcagtacacccagctgagtctgcaaccttac
tgggcccggctgactgacgcttccctgggacacctgcagagccgctgcaccctcctccag
aggctcaacctgtcctggaccggcagccgcggagctctaaccctgaccggattcagcagt
ttcatgaaggcttgtggtctcagcttggtgtgtctagagctgtcctgctgccatttcctg
aatgaggcctgtctggaggtcatctcccagacttgtccagagctgcaagagctcaacctg
tcctcgtgcgaccgcctccacccacaggccttcactcacatctctaaactaacccgcctt
cgcaggctggtgctttaccgaaccaagatagagcaaacagctattctgagcatcctgact
ttctgcatagagctgagacacctcaacttagggagctgtgtgaggattgaggactatgac
gttgtggccagtatgctggctgctcgctgtcgctcactctgctcactggacctgtggcgc
tgcagaaacctgacagatagaggcctggccgagctcgtctctggctgcaggatgctggag
gagttagacctgggctggtgtcccacactgcagagcagcaccggatgtttccaacacctt
gcccgcagcctcccacgcctgcgcaaactcttcctcacagccaaccgcaccgtctgcgac
tcagacatagaggagctggccgccagctgcccctcactgcagcatcttgacatactgggt
acgcggttggtgagtgctgcctcgctgaagaagctcctccagtcgtgtcctcagctcctc
ctcctggacgtctccttctgctcccagatagacatgcgggtcgtccaagagctctgtggc
ttcttccccaacgttgccatcaagaagagtttcactcagtga
DBGET
integrated database retrieval system
