KEGG   Lates calcarifer (barramundi perch): 108887816
Entry
108887816         CDS       T04895                                 
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03320  PPAR signaling pathway
lcf04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    108887816
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    108887816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108887816
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lcf03310]
    108887816
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    108887816
Nuclear receptors [BR:lcf03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   108887816
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 108887816
NCBI-ProteinID: XP_018538912
UniProt: A0A4W6EML4
LinkDB
Position
LG2:9750924..9761961
AA seq 464 aa
MSTLSVTDIPDVGHDESKVFDGASELQLDCMVEESSGSTTVKHDSLLSLADLSQPDDFPV
PPHNGPSLTEMSSPLPVEPNDIKLDPAAGDTSASLDGQPVKRKKGPAPKMLGNEVCSVCG
DKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAG
MLEQCVLSEEQIRLKKMKKQQEEETARTSTVVTPTPPQEAPTLDPQQQDMIEKLVAMQKQ
CNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLM
FPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagagtaaggtgttt
gacggggcctctgagctgcagctggactgcatggttgaggagagcagtggaagcaccaca
gtgaagcacgacagcctgctgtcgctagctgacctctcccagccagatgacttccctgtc
ccccctcataatggcccttcactgactgagatgagcagccctctgccggtagagccaaat
gacataaagctggatccagctgcaggtgacacatctgccagcctagatggtcaaccagtg
aagagaaagaaggggcctgctccaaagatgctgggcaatgaggtgtgcagtgtatgtggt
gacaaggcctctggtttccattacaatgtgttgagctgtgagggctgcaagggtttcttt
cgtcgcagcgtcattaaaagtgcccagtactcctgcaagaacaatggccgctgcgagatg
gacatgtacatgcgccgcaagtgccagcagtgccgcctgcgcaagtgtcgggaggcaggc
atgctggagcagtgtgtgctctctgaggaacaaatcagactaaagaagatgaagaagcag
caggaggaggaaacggcccggacgtccacagtggtcacccccacacctccacaggaagcg
cccacactggatccacagcagcaggacatgattgagaagctggtggccatgcagaaacaa
tgcaacaagagatctttccttgaccgaccaaaagtgacaccgtggccacagagtcaggac
ttgcagaaccgagaagtgcgtcagcagcggttcgcccacttcaccgagctagcgatcatg
tcagtccaggagattgtggattttgctaaacagcttcctggtttcctggagctcacaagg
gaggaccagattgctctactgaagacatcaaccattgagatcatgctgctcgagacatct
cgacggtacaaccctgctattgatagcataacatttctgaaggatttcagctataacaag
gaggatttcgccaaagcagggcttcagtttgagttcattaaccccatctttgagttttca
aaaggaatgaatgacctgcatctggatgaggccgagtatgctctgctcattgccatcaac
atcttctctgcagatcggccaaatgtgcaggatcacgatttggtggagaggttgcagcag
ccttatgtggacgcactgcgctcttacatcatgataaagagaccaaatgatcacttgatg
ttcccccgtatgctgatgaagctggtgagccttcgtacactaagtagcgtccactcggag
caggtctttgcccttcgtctccaagacaagaagcttcccccgctgctctctgaaatctgg
gacgtcaatgagtga

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