Lates calcarifer (barramundi perch): 108887980
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Entry
108887980 CDS
T04895
Name
(RefSeq) zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108887980
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108887980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_7th_ZNF462
zf-C2H2_16
zf-C2H2_15
zf-Di19
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-met
zf-C2H2_2
C2H2-zf_KIN17
zf-BED
CCB2_CCB4
Motif
Other DBs
NCBI-GeneID:
108887980
NCBI-ProteinID:
XP_018539267
UniProt:
A0AAJ7PUS5
LinkDB
All DBs
Position
LG15:27899897..28041636
Genome browser
AA seq
1487 aa
AA seq
DB search
MDKTLISGKEEESDTSRKVQSDDVEMEENKRHSPDRTAEPLEADKELAEKPRPDSVPEDG
DNVCTICGFSAKCPRSLKIHYARKHGKNSKNSDKTEKPAAKSENICDISPAETQQETDME
TESGAEVKQNQESLELRSTTNDSGMSTKSSTKKQSLSDKQQADQEDVTPTQERRVSKRTP
KPKMIHSCNYCGQEFRDKAPLDVHVQRYHTKDTPYTFDADENMDDEEEAGDSGSPVKATP
TRVVPKQAQSRFQLKCAHCDFRVSNPSLLESHGRVKHLDQEWYRCKLCNFFSATREWMDV
HLSSDSHVQQQTGKKNAESSSFEVYVECVSRDSAGDSANIDDRAQAAGEIVVTLTEGDQE
TEEAVEAAKAELVEVEDSELEPPRKKRGRPKQGSTTTCGYCGLVVSNATNLSVHVRRKHS
KEYGYSCTLCNYSCVTKGDMDRHCITKKHVRRAQECANKNPNRASQSTNKEQESDNTVSK
GHSGGEPTQSDTSQKKSKYDSVNACSHCDFVAQSIPSLHLHVKRKHTKDFEYVCLACSYY
AVTSREMSRHANTEKHKQKSQKYLEPLGAEGQRALALPLKLKEVIELAGANSNPECEPLS
PTEESGSCSDDSQAMEGQSTAASAITTGPVDAEVSVAGSADEKQTENITASTDGESDLAN
QTKFKVVSEPQQAPADLQPAVDQSAQQESQEEVGTQEGDERSHADVMMTDAKSDSSHSDT
QMSKAPPFDACIVSMKTLAEQEQALQEGLSLEGEAAVICLTGGSPVPSSLPAPSSAYIKK
LKPKEVKVREEAKGSSTRIRCEDCGFMADGISGLNVHISMKHPSKEKHFHCLVCGKSFYT
ESNLHQHLTSAAHLRNEQNSVEELPEGGASFKCVKCTDRFETEQELFVHIKEKHEELLRE
VNKYVLEDTEQINREREENQGSVCKYCGKVCKSSNSMAFLAHIRTHTGSKPFMCKICNFA
TAQLGDARNHVKRHLGMREYKCDICGWAFVMKKHLSTHLLGKHGVGQRKERKFECELCER
SFSEKWALNNHMKLHSGEKPYKCAWPSCHYAFLNLSAMKDHYRTHTGEKSYLCDLCGFAG
GTRHALTKHRRQHTGERPFKCKLCNFASTTQSHLSRHKRVHTGEKPYRCPWCDYRSNCAE
NIRKHILHTGKHEGVKMYNCPKCNHATNSPMEFRNHLKENHPDIENPDLAYLHAGIVSKS
FECRLKGQGATFVEAETVGSPVRRKGSSEASGHDEEVQQVIIIQGYGGGEVAIDQALEES
AAATLQTLAMAGQVAEVLHITEDGQVIASGREVASAGAHLAGGSTQYVVLESGEAREELR
AVARGEVAVAAAGKSHIVSESSTALDALLSAVSEMGHQEEMQGEAAVIHEVLTPEIVEAV
QSEAQSEVKQEQEEVRVIQETGQEEMQEVLQLAASQMMKEGLTQVIVNDEGTHYIVTELD
NCTLQVEGSVYGEAGAGDGEVQQAEQQAGEEMVVYLDGAPHNIVLEG
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacattgatatcaggaaaagaggaggaaagtgacaccagtaggaaggtgcag
tcggatgatgtggaaatggaggaaaataaaagacactctcccgataggactgctgagccc
ctcgaagcagacaaggaactcgctgagaagccgcggccagactctgtacctgaagatggg
gataacgtctgcacaatttgtggcttctcagccaaatgcccaagatcactgaagattcac
tatgcacgaaagcatggaaagaactcaaagaacagtgataaaactgaaaaaccagctgca
aaaagtgaaaatatctgtgatatcagtccagctgaaacccaacaggagacagacatggag
acagaaagtggtgctgaggttaaacaaaaccaggagtctttggaattaagatcaacaacc
aatgacagtggcatgagcacaaagagttcaactaaaaaacagagtctatcggacaaacag
caggcagatcaagaggacgtgactcccacccaagagagaagagtgagcaagcgaaccccc
aaacctaagatgattcactcctgcaactactgtgggcaagagtttagggacaaggctcct
ttagatgttcatgtccagagataccacaccaaagacactccatacacatttgatgctgat
gagaacatggatgatgaagaggaagctggggattctgggagccctgtgaaagctactcca
acacgagtggtgcccaaacaagcgcagagcaggttccagctgaagtgtgcacactgtgat
tttagggtcagtaacccttcgctgctggagagccacggtcgagtcaaacacctggaccag
gagtggtaccgttgcaaattgtgcaactttttttcagccacacgtgagtggatggacgtt
cacctgtcctcagatagccatgtgcagcagcagacagggaagaaaaatgcagaatcttcc
tcgtttgaagtctatgttgagtgcgtaagcagagacagtgctggagatagtgcaaatata
gacgatagggctcaggctgctggagaaatagtagtcactttgacagaaggagaccaggaa
actgaggaggcagtggaggcagctaaagctgagttggttgaggtggaagattcagagctt
gaaccccccagaaagaaaagaggaagaccgaagcaagggtccacgactacttgtggatac
tgtggcctggtggtgtcgaacgccaccaacctgagtgttcatgtccggcgtaaacacagc
aaggagtacggatacagctgcactctgtgcaactacagctgcgtgaccaaaggagacatg
gatcgtcactgtatcaccaagaaacatgttagacgtgcacaagagtgtgcaaataagaac
cctaacagggcctcacagagcaccaacaaagagcaggaatctgacaacacagtctctaaa
ggacacagtggaggagagcctactcagtcagacacaagccagaaaaaaagtaaatatgac
tctgttaatgcttgcagccactgcgattttgttgctcaatcaattccttctctacatctc
cacgttaagagaaagcacaccaaagattttgagtatgtctgtctagcatgtagctactat
gctgttacgagcagagaaatgtctcgccatgcaaatacagagaagcacaaacagaaaagc
cagaaatacctggagccactgggcgctgagggacaaagagctttggcgctcccattgaag
ctgaaggaggtcattgagcttgcaggggcaaactctaaccctgaatgtgaacctcttagc
cccacagaagagtctggatcttgttctgatgatagtcaagcaatggaaggtcagagtaca
gctgcctctgccatcaccacaggacctgttgatgctgaggttagtgttgctggcagtgca
gatgagaagcaaacagagaatattacagcctccactgatggagaatcagatcttgccaac
cagactaaattcaaagtagtatctgaaccccagcaggctccagcagatcttcagcctgca
gtcgaccagtctgcacaacaagagagccaggaggaagttggtacacaagaaggcgatgaa
cgttcacatgctgatgtgatgatgaccgatgcaaaaagtgacagctctcattcagataca
caaatgtccaaagcccctccttttgatgcctgcattgtatcaatgaagacacttgctgag
caggagcaggctctgcaggagggtctgtctctggaaggtgaggctgctgtgatatgtctg
accggaggctcacctgtgccctccagcctcccagcccccagttctgcatatattaagaag
ctcaaacccaaggaggtgaaggtgagagaggaagccaaaggaagcagcactcgcatacgc
tgcgaggactgcggcttcatggccgacggcatcagtggcctcaacgtccacatctcgatg
aagcacccgtccaaggagaagcatttccactgcttggtgtgcggcaagtcattctacaca
gagagcaacctgcaccagcacctgaccagcgccgcgcacctccgcaacgagcagaacagc
gtggaggagctacctgaggggggagcgagcttcaagtgcgtgaaatgcacagaccgcttc
gaaacagagcaggagctgtttgttcacattaaagagaaacacgaagagctcctcagagag
gtcaacaagtatgtgctagaggacacggagcagatcaatagggagcgtgaggagaaccag
ggcagtgtgtgtaaatactgtggcaaggtgtgcaagagcagcaactccatggccttcctg
gcacacattcgcactcacactggatctaagcccttcatgtgtaagatctgcaactttgca
accgctcagctgggagacgcaaggaaccacgtgaagagacaccttggcatgagagagtac
aaatgcgacatctgtggatgggcctttgtgatgaagaaacacctcagcacccacctactg
ggaaaacatggagttggacagcgtaaagagaggaagtttgaatgcgagttgtgtgagcgc
tccttcagtgaaaaatgggccctaaacaaccacatgaaactgcacagtggggagaaacca
tataagtgtgcctggccgtcctgccactacgccttcctcaacctgtcagccatgaaggac
cactataggacacacactggagagaagtcttatctgtgtgacctgtgcggttttgcagga
ggcacgagacacgccctcaccaaacacagacgccagcacacaggagaaaggcccttcaaa
tgcaagctctgcaacttcgcctccaccacgcagtcccacctatcgcggcacaaacgtgtt
cacaccggggagaaaccgtaccgctgcccctggtgcgactacagatctaactgtgctgag
aatatccggaagcacattctccatacgggaaaacacgagggtgtgaagatgtacaactgt
cccaaatgtaaccatgccaccaactctcccatggaattccgcaaccatctgaaggagaat
caccctgacattgagaacccagacctcgcctacctacatgcaggtattgtgtccaagtct
ttcgagtgtcgtctgaagggccagggggctacatttgtggaggcagagaccgtgggctcc
cctgtacgcaggaagggctcatcagaggcatccgggcacgatgaggaagtgcagcaggtc
atcattatccagggctatggcggcggggaggtagccatcgaccaggccctggaggagtct
gctgctgccaccctgcaaacactggccatggctggccaggtggccgaggtgctgcacatc
acagaggacggacaggtcatagcctcaggcagggaagtggcatccgcaggggcccacctg
gctggaggaagcacccagtatgtggtgctggagtccggggaggccagggaggagctgcgg
gctgtggccagaggagaggtggcagttgccgccgcaggaaaaagtcacattgtgtccgag
tcgtccacggccctggacgctctgctcagcgccgtcagcgaaatgggccaccaggaggaa
atgcagggagaggcagccgtcatccacgaggtcctgacccccgagatagtcgaagccgtg
cagagtgaggcgcagtcggaggtgaaacaggagcaggaggaggtgcgggtcatccaggag
accggccaggaggagatgcaggaggtgctgcagctcgccgcgtcacagatgatgaaagaa
ggtctgacccaagtcatcgtcaatgacgaaggcactcactacatcgtgacggagctggac
aactgcaccttacaggtggagggaagcgtgtatggagaggctggggcaggtgacggggag
gtgcagcaggcagagcagcaggctggagaagaaatggtggtttatttggatggagcccct
cataatatagtcctggaggggtag
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