Lates calcarifer (barramundi perch): 108888081
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Entry
108888081 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 2b
KO
K11457
polyhomeotic-like protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108888081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108888081
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108888081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
108888081
NCBI-ProteinID:
XP_050930722
UniProt:
A0AAJ8BCY2
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All DBs
Position
LG12:6677294..6711783
Genome browser
AA seq
911 aa
AA seq
DB search
MESETGAPASTASSTGTTTSSTSTSSSSTTAASSTSTSNTTATTSITSTSSSNSSSSSSS
SSNTSNSSSSSTTAGRQAVSQLSAVYSGMPDRQTVQVFQQALHRQPNTAAQYLQQMYAAQ
QQHLMLQTAALQQQHSLSTAQLQSLAAVQQASIAAGRQSSSQNGTSSQQTGSTQATINLT
TSPAAAQLISRAQSISSTPTSISQQAVLLGSPSSPTLTASQAQMYLRAQMAQQSNLVQVA
RSLGRAVPLSPQLIFTPTATVTAVQSESSTQASSQNQVQNLAIRGQQGATTSSSQTQTLQ
ALSLKQSPVPIQPTSLIKNSSQGTQAATGGKTSSSDSLSDGGKKGDGAAVTEXRAINMSR
SVTAVGAQPLIAPAYTQIQPHSLVHQHKQQQQFVVHQSQGSQKTTGQLLQTASIQPSQHP
VPVLPKXPAPHQPSTPSQQATIFHSTISPHALHSSLSHAKAQPVQLTAINLQIQPTASRL
VQDSKDKPTSLVVRETCTTPSTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPT
PLPSQPTKPVEQPKVDTATPAVQPQGGGTTKRPSAAPGSPPPAMTSGNESEAPSVTGSTP
QNGENKPPQAIVKPQVLTHVIEGFVIQEGAEPFPVCVERLPILIDSPKKLDHQLSSDPDK
TPVSNAANTDSEPEDQPEKEQEPKLTCEYCGWVDFAYTFKGSKRFCSVVCAKRYNVGCTK
RIGLFHPERNKPTNRWRRRSQGRSSIEAKKQKLSPSPQQTQGGSISSPHPSQPSQEESSP
CSDMSSYEEPPSPLSAASSGPHLAPTPAPAQVTVHRQPSRASDQEGCTGRDAPSLCQRFL
PNDPAKWNVEEVYEFIRSLPGCQEIADEFRSQEIDGQALLLLKEDHLMSTMNIKLGPALK
IFARINMLKDL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgagacgggggcccctgcctccacggccagcagcaccgggaccaccacctcc
tccacctccaccagctcctccagcaccacagctgccagcagtactagtacctctaacact
actgctactacttctatcacttccactagcagtagtaatagcagtagcagcagcagtagt
agtagtaacactagcaatagttccagtagtagtactacagcaggaagacaggcagtgtct
cagctgtctgctgtttacagtgggatgcctgaccgacaaacagtgcaggtgttccagcag
gcgctacacagacagcccaacacggcagcacagtacctgcagcagatgtacgccgctcag
cagcagcatcttatgttgcaaactgcagccctccagcagcagcacagcctcagcaccgct
cagctccagagcctggccgctgtacagcaggccagtatcgcagctgggcggcaaagctcc
tcacagaatggcacttcatctcagcaaacgggatctactcaggctacgatcaacctgacc
acctccccagcggcagctcagctgatcagccgggcccagagcattagttctacccccacc
agtatttcccagcaggctgttctgctgggcagcccatccagtcccactctcacagccagc
caggcacagatgtacctgcgtgcacagatggcgcagcagagtaacctggtgcaggtggcc
aggagcctgggcagggctgttccactgtcccctcagctcatcttcactccaacagccaca
gtgacggctgtccagtcagaaagctccacgcaggcctcctctcagaatcaggtacagaac
cttgctatccgtggccagcagggggcgaccacgtcttcctctcaaactcagactctgcag
gctctcagtctgaagcagagccctgtgcccatccagcccacctcactgatcaagaattct
agccaggggacgcaggccgccacaggggggaagaccagctcctccgacagcctctccgat
ggagggaagaagggagatggtgcagcagtcacagaangtcgagctataaacatgagccgc
agtgttacggctgtcggtgctcagcctctgattgctccagcgtacactcagattcagccg
cactccctggttcatcagcacaagcagcagcagcagttcgtggtccaccagagtcaaggt
tcccagaagacgacgggccagctgctgcagacagcctccattcagccatcgcagcaccct
gtccccgtgcttcccaaannccctgctccacaccagccctccacgcccagccagcaggcc
accatcttccactccaccatcagcccccacgccctccactcctccctcagccacgccaaa
gctcagcccgtccagctcaccgccatcaaccttcaaatacagccaacggcctctcgactg
gttcaggacagtaaagataagccgacctcactggtggtgagagagacgtgtacgacccca
tccactcagcaacagcagcaacagcaacaacagcaacagcaacagcaacagcaacagcaa
caacaacagcagcaacaacagcagcagcagcagcagcagcagcagcaacagcaacctaca
cctttgccgtcacaacccaccaagcctgtagagcagcccaaggtcgacacagctacacca
gctgttcagccacaaggagggggcacgaccaagaggccgagcgctgcacctgggtcccca
cctccagccatgacctcaggaaatgagagcgaggcgcccagcgtgacgggcagcaccccg
cagaatggagagaacaaaccaccccaggccatcgtcaagccccaggtcctcacacatgtc
atcgagggctttgtcatccaggagggagctgagccgttcccggtctgtgtggagcgcctg
cccatccttattgacagcccaaagaagctggatcatcagctgtcctcagaccctgacaaa
accccagtcagcaacgcagcaaacacagactctgagccggaggaccagccagaaaaagaa
caagaaccgaagctgacgtgtgagtactgcggctgggttgacttcgcctacaccttcaag
ggctctaaaagattctgctcggtggtttgtgcaaagaggtacaacgtgggttgcacaaag
aggataggccttttccatccagagaggaataaaccaacgaaccgctggcgtagaagatct
cagggtcgctccagtatagaggcaaagaagcagaagctgtccccctcaccgcagcagact
cagggcggctccatatcctcaccgcatccctcgcaacccagtcaggaggagtccagccca
tgttcggacatgtccagctacgaggagccgccatcccccttgtcagcagccagctcggga
ccccacctggcccccaccccagctccggctcaggtcaccgtccaccggcagccgagcagg
gcctcggaccaggagggctgcactgggagggacgcgccctcgctctgtcagcgcttcttg
cccaacgaccctgccaagtggaatgtggaggaggtttatgagttcatccgttcactgcca
ggttgtcaggagatagcggatgagtttcggtctcaggagatcgatggacaggccttgctc
ctgttaaaagaggaccacctcatgagcaccatgaacattaaactggggcctgcgctcaag
atctttgcacgcatcaacatgcttaaagacttatag
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