Lates calcarifer (barramundi perch): 108888581
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Entry
108888581 CDS
T04895
Name
(RefSeq) chitobiosyldiphosphodolichol beta-mannosyltransferase
KO
K03842
beta-1,4-mannosyltransferase [EC:
2.4.1.142
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00510
N-Glycan biosynthesis
lcf00513
Various types of N-glycan biosynthesis
lcf01100
Metabolic pathways
Module
lcf_M00055
N-glycan precursor biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
108888581
00513 Various types of N-glycan biosynthesis
108888581
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108888581
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.142 chitobiosyldiphosphodolichol beta-mannosyltransferase
108888581
Glycosyltransferases [BR:
lcf01003
]
N-Glycan biosynthesis
Dol-linked oligosaccharide
108888581
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Motif
Other DBs
NCBI-GeneID:
108888581
NCBI-ProteinID:
XP_018540157
UniProt:
A0A4W6DYV9
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All DBs
Position
LG11:2428727..2432195
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AA seq
489 aa
AA seq
DB search
MASHGTGAACLTVAVAALLAVFCGTGSDVPGPVVCLTVVTALVSLWSLRLRRRDAGTERR
VCVLVLGDIGRSPRMQYHALSLSKHGYNVTFVGFLDTKPHQDVLQEERIRIVSIAEVKGV
GVGPKLVTYVTKVIIQCLQLLYVLLRMELQSHLLLQNPPGLPGIAVAWLVCVLRGSRFII
DWHNYGFTIMALSHGQRHPVVRVAKWYEHVFGPLATHNLCVTNAMKDDLQENWGIKATTL
YDRPPSIFRETPLKLQHELFMRLANTYPQFQHRGCEEVEVEKTIFSVRDLTDNSVTLRAE
RPALLLSSTSWTEDEDFSILLKALQEYEGFIKGGASLPSLVCAITGKGPQKEHYRKLIDS
LHLEHVKICTPWLEAEDYPVLLGSADLGVCLHKSSSGLDLPMKVVDMFGCCLPVCAIHFN
CLHELVKHEENGLIFRDSQELAQQLKSLLSEFPSSEGRLGLFRRNLRTSRGQRWDDNWDQ
NVLPLITAP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcacggcactggcgcggcttgtctgacagttgcggttgcggcgcttttagct
gtgttttgtggaaccggatcagatgtaccgggtccggttgtgtgtctgacggtggtaacc
gcgctggtgtcgctgtggtcgctgaggctgcggcggcgggacgccgggactgagcggcgg
gtgtgtgtgctggtgctgggggacatcggtcgcagtcctcggatgcagtatcacgctctg
tccctcagcaaacacggatataacgtcacttttgtcgggtttttagacaccaaacctcat
caagacgtcctgcaggaggagagaatcaggatcgtctccatagcagaggtgaaaggtgtt
ggagtgggaccaaaactcgtcacatatgtgacgaaggtgatcattcagtgtctgcagctt
ctgtatgtgctgctgaggatggagctgcagtctcatcttctactgcagaatccccctggt
ctgcccggcatcgcggtggcctggttggtgtgcgtcctgcgcggcagcagattcatcatc
gactggcacaactacggcttcaccatcatggccctgagtcacggccagagacacccggtg
gtgcgagtggcgaagtggtacgagcacgtcttcggccctctggccactcacaacctgtgt
gttaccaacgcgatgaaggacgacctgcaggaaaactggggcatcaaggcgacgactctg
tacgaccgacctccatccatcttcagagagactccactgaagctgcagcacgagctcttc
atgagactggccaacacgtatcctcagttccagcacagagggtgtgaggaggtggaggtg
gagaagacgatcttctcagttcgtgatctcacagataactcggtgaccctgagggcggag
cggccggcgctgctgctcagcagcaccagctggacagaggatgaggacttctccatcctg
ctgaaggctcttcaggagtatgaaggtttcattaaaggcggagcttcgttaccgtcgtta
gtctgcgccatcacaggtaaaggtcctcagaaagaacactacaggaagctgatagactct
ctgcatctagaacatgtgaagatctgcactccctggctggaggcagaagattatcctgtt
ttattgggttcagcagatctgggtgtttgtctccacaagtcgtccagcggtctggatctg
cccatgaaggtggtggacatgttcggctgctgtctgcccgtctgtgccatccacttcaac
tgtttacacgagctggtgaaacacgaggagaacggactgatcttcagagactctcaggaa
ctcgctcagcagctcaagtctctcctgtcagagtttcccagctcagagggcagactgggt
ttgttcaggaggaacctccgcaccagcagagggcagcgatgggacgacaactgggaccag
aacgtcctgcctctcatcactgctccatga
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