Lates calcarifer (barramundi perch): 108888686
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Entry
108888686 CDS
T04895
Name
(RefSeq) exostosin-1a
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108888686
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108888686
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
108888686
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
108888686
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108888686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
108888686
NCBI-ProteinID:
XP_018540304
UniProt:
A0A4W6EJ19
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Position
LG15:complement(26808696..26845023)
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AA seq
743 aa
AA seq
DB search
MQAKKRYLILFSAGACFILLFCFGGIQVPLSRRGPSRRDDRSLNGYHPAARWRRFPGYLQ
PFSSWEKDRSDDHNEHISPRQKRDANSGVYIGKRCRMESCFDFSLCEKNGFKVYVYPQQK
GEKMSESYQNILSSIEGSRFYTPDPGQACLFVLSLDTLDRDQLSPQYVHNLKTKIQSLPL
WNGGKNHIIFNLYSGTWPDYTEDLGFDIGLAMLAKASISTENFRPNFDVSIPLFSKDHPR
TGGERGYLKHNTIPPYRKYMLVFKGKRYLTGIGSDTRNALYHVHNAEDVVLLTTCKHGKD
WQKHKDARCDKDNAEYDKYDYREMLYNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNG
WELPFSEIIDWNTAAVIGDERLLLQIPSTVRSIHQDKILSLRQQTQFLWEAYFNSVEKIV
LTTLEIIQDRVLQHTSRSNLMWNSLPGGLFTLPQYSTYLGDFPFYYAKLGIKPYSKFTAI
IHVVTPLVSQSQPVMKLLVAVAKSQYCAQVIVLWNCDKPLPAKHRWPATSVPVIVIEGES
KVISSRFLPYDTIPTDAVFSLDEDTVLSTTEVDFAFTVWQSFPDRIVGYPARSHFWDSNK
ERWGYTSKWTNDYSMVLTGAAIYHKFYHYLYTTYLPVSLKTMVDQMSNCEDILMNFLVSS
VSKLPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGTMPLIHSQMR
LDPVLFKDQVSILRKKYRDIERL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacggtacttaattctgttctccgccggtgcgtgtttcatcttgctg
ttttgttttgggggtatacaagtcccgctatccagacggggacccagccggcgtgatgac
cgcagcctcaacggatatcaccccgcggctcggtggcgtcgcttcccggggtacctgcag
cctttcagctcctgggagaaagaccggagcgatgatcacaatgaacacatatctcctaga
cagaagagggacgctaactcgggcgtttacattggaaaacgctgcagaatggagtcctgt
tttgatttctccttgtgtgagaaaaatggatttaaagtttatgtctacccccaacagaaa
ggggaaaagatgtcagagagttatcagaacatcttgtcctctattgaggggtccaggttc
tatacacctgacccaggacaggcatgcctgttcgtcctgagtctggacacactggaccgg
gaccagctttcaccccagtatgtgcacaacctgaaaacaaaaatccagagccttcctctg
tggaatgggggcaaaaaccacatcatcttcaacttatactccggtacctggccagactac
acagaagacctcggctttgacattggccttgccatgttggctaaagccagcatcagcacc
gagaactttcggcctaactttgacgtctccattcctcttttctctaaagatcatccaagg
acaggaggggaaagaggctacctgaaacataacaccattcccccttataggaagtacatg
cttgtttttaaggggaagaggtacctaactggaataggttcagacactaggaatgcttta
tatcatgttcataacgcagaagatgtggttctcctcaccacttgtaagcatgggaaggac
tggcaaaagcacaaggatgcacgctgtgataaagacaatgcagaatatgacaagtatgac
tacagagagatgctgtacaactccacattttgtctggtacctcgaggacgaaggctgggt
tcttttcgcttcttggaggctttgcaggcggcttgtgtgcctgtgatgctaagcaatggc
tgggagcttcccttctctgagatcattgactggaatacggcagctgtgattggggatgaa
aggctgctattacagatcccctcaacagtgcgctccatccaccaggataagatcctgtcc
ctgagacagcagacccagttcctatgggaggcttacttcaactctgtggagaagatagta
ctcaccacactggagatcatccaggaccgggttctgcagcacacctcaagaagcaacctc
atgtggaacagtctccctggaggacttttcaccctgcctcagtactctacatacctgggg
gacttccccttctattacgctaagctgggtatcaagccatactccaagtttacagcgatc
attcatgtggtgacgccacttgtctcccagtctcagccagtcatgaagctacttgtggct
gtggccaaatcccagtactgtgcccaggtgatagttctgtggaattgtgacaagcctctt
cctgccaagcaccgctggcctgccacctcagtccctgtcattgtcatagaaggggaaagc
aaggtgataagcagtcgttttctgccctacgataccatccccactgatgctgtgttcagt
ctggatgaggacaccgtgctctccaccacagaggtggactttgccttcacagtgtggcag
agtttcccagaccgcatcgttggttacccagcccgcagccacttctgggacagcaacaag
gagcgttggggctacacttccaagtggaccaacgattactcaatggtgctgactggggct
gccatctatcacaaattctaccactacttgtacaccacttaccttccagtcagtctgaag
actatggttgaccagatgtcaaactgcgaggatattctgatgaattttctggtgtcatca
gtctctaaactaccacccatcaaggtcacccagaagaaacaatataaggagaccatgatg
ggacagagctcccgggcatctcgttgggctgatccggaccattttgcccagcgtcagacc
tgcatgaacaagtttgccagctggtttggcaccatgcccctgatccattctcagatgagg
ctggacccagtcctgttcaaagaccaggtgtccatactgcggaagaagtacagggatatc
gagagactataa
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