Lates calcarifer (barramundi perch): 108889331
Help
Entry
108889331 CDS
T04895
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108889331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108889331
Cytokine receptors [BR:
lcf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108889331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
108889331
NCBI-ProteinID:
XP_018541244
UniProt:
A0A4W6BW96
LinkDB
All DBs
Position
LG15:complement(24372809..24392981)
Genome browser
AA seq
417 aa
AA seq
DB search
MSSRIARSNPAMKLIVLFTASLSWAFQQQAVPPKYQYRDPVTSDLLLCDQCPPGTAVKRH
CTADTPTECQPCPERHFAENWHWGDTCQYCTLVCREKQLVKQNCNSTHDQLCECAPGFHL
VVEFCIAHSTCLPGYGVTALGTPVSDTVCEHCPAGHFSPGGSSTEPCQPHRNCSDLGLKT
LRWGTSTSDSLCSQHKTETLECSQHHTLCHTDVTLCEEAVFQSLASLRLSSVPLERLLES
LPGRRVDRKSLERLKKACSPQQQVLHLLRLWREQNKDQDKLYGIIQGVNHCERKVSRCNG
LKNLTLDDLLMVSNSLPGVKVQQEDVRAVFSTCLPRQYILQLLHLWKMANYDLDLAKGLS
HSLRVLRSQGAPRYLLKGLKKISRIIGTTSAHKMYEKMFVSMLQDELCFKAHKPLNE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcggattgcgagatccaacccggccatgaaactgatagtgctcttcacagcc
tctctctcctgggccttccagcagcaggccgtgccaccaaagtaccagtaccgtgaccct
gtgacatctgacctccttctgtgtgaccagtgccctcccggcacggccgtgaaacgacac
tgcaccgctgacacacccacggagtgccagccctgtcccgagaggcattttgctgagaac
tggcactggggggacacatgccaatattgcaccttggtgtgtagggagaaacaactagtc
aaacagaactgcaacagcactcatgaccaactgtgtgagtgtgctccaggtttccaccta
gtggtggagttctgcatcgcacacagtacctgtctgcctggctacggagtgacagcttta
ggtacaccagtgagtgacactgtttgcgagcactgtcctgccgggcatttctctcctggc
ggctcctctaccgagccgtgtcagccccacagaaactgctcagatttgggcctgaagaca
ctgagatggggcacatccacttcagatagtctctgtagtcagcacaagacggaaacactg
gagtgctctcagcatcacactttgtgccacactgatgtgaccctgtgtgaggaggcagtc
ttccagtctctggcctcgctgcgactgtcctctgtgcccctggagaggctgctggagagt
cttccggggcgtagggtggatcgtaagagcctggagaggctgaagaaggcctgctctcct
cagcagcaggtcctccacctgctgcgactgtggagggagcagaacaaagaccaggacaag
ctgtacggcattatacaaggtgtgaaccactgcgagaggaaggtctcccgctgcaacggc
ctgaagaacttgaccctagatgacctcctaatggtctccaacagcctgccgggggtgaaa
gttcagcaggaggatgtccgggccgtgttctctacctgcctgcccaggcaatacatcctg
cagcttcttcacctctggaagatggcaaactacgacctggatctagccaagggtctctct
cacagtctgagggtgctgcgcagccagggggcaccgcgctatctgctgaaaggcctgaag
aagatcagccgcatcataggaaccacctccgcacacaagatgtacgagaagatgtttgtc
agtatgcttcaggatgagttgtgctttaaggctcacaagccattaaatgaataa
DBGET
integrated database retrieval system
