Lates calcarifer (barramundi perch): 108889482
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Entry
108889482 CDS
T04895
Symbol
b4galt5
Name
(RefSeq) beta-1,4-galactosyltransferase 5 isoform X1
KO
K09905
beta-1,4-galactosyltransferase 5 [EC:
2.4.1.274
2.4.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00512
Mucin type O-glycan biosynthesis
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
Module
lcf_M00066
Lactosylceramide biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108889482 (b4galt5)
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
108889482 (b4galt5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108889482 (b4galt5)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.274 glucosylceramide beta-1,4-galactosyltransferase
108889482 (b4galt5)
Glycosyltransferases [BR:
lcf01003
]
Glycolipid biosynthesis
Glycosphingolipid
108889482 (b4galt5)
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
108889482 (b4galt5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
108889482
NCBI-ProteinID:
XP_018541443
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Position
LG6:16511192..16541384
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AA seq
385 aa
AA seq
DB search
MPTHLRFRRRSFLGLLFLFSLSTSALYFIYSAPGIVNEYVFMVQARGIQIRENVKNIGAQ
VLEQVVRGAYNVNGTDYSYDFNMSESDAPPTTYLPEGFTYLPSQVCPERLPSMKGRLEVN
MSEVSLEEVERSLLEGEPSMAPGGYWKPKDCLPRWKVAILVPFRNRHEHLPILLRHLVPV
LQKQRLQFAFYVIEQVYTQGGTEPFNRAMLFNVGYKEAMKDLDWDCLIFHDVDHLMENDR
NYYGCTDMPRHFAVKLNKYSYMLPYNEFFGGVSGLTVKQFKKINGFPNAFWGWGGEDDDL
WNRVRFANFTVSRPHGEQGRYKSIPHHHRGEVQFLGRYSLLRHSKERQKVDGLNNLNYSP
VVSRRPLYTNITVSLSRKLAPVADY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacatttgcggttccggagaaggtcattccttgggcttttattccttttttca
ctgtccacctccgcattgtacttcatctactccgcccccggaatcgtgaatgagtatgtg
ttcatggtccaagccagagggatccagatcagggagaacgtgaagaacattggggctcag
gttctggagcaggtggtgagaggggcttacaacgtcaatggtacagattactcctatgac
ttcaacatgagtgagagcgatgctcctcccaccacatacctccccgagggcttcacatac
ctcccctcacaggtttgccctgagaggctgccctccatgaagggcaggttggaggtgaac
atgagtgaggtatccctggaggaggtggagagatccttgctggagggagaacctagcatg
gccccaggaggctactggaagcccaaagactgtttacctcgctggaaggtggcaatccta
gtcccattcaggaatcgacacgaacacttaccaatcctcctgagacacctggtgccagtg
ctgcagaaacagagactccagtttgccttttatgtcatagagcaggtatacactcagggg
ggcacagagccatttaaccgggccatgttgttcaatgtgggctacaaggaggctatgaag
gacctggactgggactgtctgatcttccatgacgtggaccacctcatggagaacgacagg
aactactacggctgcacagacatgccccgacactttgcggtcaagctcaacaagtactcc
tatatgcttccgtataatgagttctttggcggtgtcagtggcctgacggtgaagcagttc
aagaagattaatggatttcctaatgcattctggggttggggaggagaggacgatgacctc
tggaacagggtgcggtttgccaacttcacagtaagtagaccacacggagagcagggacgc
tacaagtcaattccgcatcatcatcgtggcgaagtccagttcctgggaaggtatagtcta
ctacgccattcgaaggagagacagaaagtggatggtctcaacaacctgaactactcgcct
gtagtgtccaggaggcctctctacaccaacatcacagtcagcttgagcagaaagcttgca
cccgtagctgactactga
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