Lates calcarifer (barramundi perch): 108889485
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Entry
108889485 CDS
T04895
Name
(RefSeq) focal adhesion kinase 1 isoform X1
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04012
ErbB signaling pathway
lcf04148
Efferocytosis
lcf04370
VEGF signaling pathway
lcf04510
Focal adhesion
lcf04517
IgSF CAM signaling
lcf04518
Integrin signaling
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
108889485
04370 VEGF signaling pathway
108889485
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108889485
04518 Integrin signaling
108889485
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108889485
09144 Cellular community - eukaryotes
04510 Focal adhesion
108889485
09142 Cell motility
04810 Regulation of actin cytoskeleton
108889485
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108889485
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108889485
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108889485
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
108889485
Protein kinases [BR:
lcf01001
]
Non-receptor tyrosine kinases
FAK family
108889485
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108889485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_C_FAK1
FERM_N_2
FERM_M
FERM_F2
Kinase-like
Haspin_kinase
DUF6089
Motif
Other DBs
NCBI-GeneID:
108889485
NCBI-ProteinID:
XP_018541473
UniProt:
A0A4W6CEX8
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All DBs
Position
LG15:complement(24086228..24146041)
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AA seq
1137 aa
AA seq
DB search
MENSGCIPLCWSKGACIYAQHPLPKYDGQLAPAGAFESGMASSSYLEPNLNHSAAGGCGV
KSRSGMPGGPGVGTSSSAGGLERPPGSMDRVLKIFHYFETNSEPCTWASNIRHGDATDVR
GVIQKIAEIHKLRCVSSLGLRLTHLHSDALHWLHPDLGVCHVREKYEKQHPQEEWRYELR
MRYLPKGYLSHFSEDKPSLNYLYHQVKSDYMQHIADQVDQDVALKLGCLEIRRFFREMPG
NALDKKSNYELLEKDVGLRRFFPKSLLDSLKAKTLRKQIQQTFKQFANLNDEQSIHKFFE
IVSPIYRFDKECFKCALGSSWVISVELAIGPEEGISYLTDKGSTPTHLANFNQVQSIQYS
ALEEKDRKGMLQLNVAGAPEPLTVTTASLTTAENMADLIDGYCRLVSSATHSFIVRVHKE
GDRALPSIPKVSNHEKRMEKRMDGVRTRAVCVSGHTSGDETDDYAEIIDEEDTYTMPSKY
YGLDQARDYEIQRDRIELGRCIGEGQFGDVHQGVYISPENPALSVAVKTCKNSTSDSVRE
KFLQEALTMRQFDHPHIVKLMGVITENPVWIIMELCTLGELRSFLQVRKYSLDLATLILY
SYQLSTALAYLESKRFVHRDIAARNVLVSTVDCVKLGDFGLSRYMEDSSYYKASKGKLPI
KWMAPESINFRRFTTASDVWMFGVCMWEILMYGIKPFQGVKNNDVIGRIENGERLAMPPQ
CPPTLYSLMTKCWSYDPSKRPRFNELKTQLSTILEEEKVQQKERNRMEMRRQVTVSWDSG
GSDEAPPKPSRPGYPSPRSSEGFYPSPQHPGHYQMAGYPGPHTLPSVPSALYPPQAAMLD
THHAHTHPRHHVHTHSHAQHLPQPHGQDMVLWGSAMEDRAVDMQQCVGQQCLLMEEQLMI
QQQQMEEDQRWLEQEERLLKPDTRSSRGSLDREEGGLQPPTGNQHIYQPVGKPEHAAPPK
KPPRPGAQSQVGSLACLNTGDSYNDGVKLQPQEISPPPTANLDRSNDKVYENVTGLVKAV
IEMSSKIQPAPPEEYVPMVKDVGLALRTLLATVDETLPQLPASTHREIEMAQKLLNSDLA
ELIGKMKLAQQYVMTSLQQDYKKQMLTAAHALAVDAKNLLDVIDQSRLKMMAQSRPH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcggctgcatcccactctgctggagcaagggggcttgcatctatgcacag
caccccctaccaaaatatgacggccagttagccccagcaggagcatttgagtcaggcatg
gcgtcgtcttcctacttggagcccaacctcaatcactctgcagcaggtggttgtggggtt
aaatcccggtctgggatgcctggcggtcctggtgttggcaccagcagctcagccggaggc
ctcgagcggcccccaggctccatggaccgggttctcaagatcttccattactttgagaca
aatagtgaaccatgtacctgggctagtaatatcaggcatggagatgctacagatgtcagg
ggtgtcatccagaagatagcagagattcacaaattgcgctgtgtgtcctctctgggcctc
cgtctcactcatctgcactccgatgctctccattggttacaccctgatttgggcgtgtgt
catgtcagggagaaatatgagaagcagcacccccaggaggagtggaggtatgagttacgg
atgcggtaccttcccaaaggttatctcagccatttctctgaagacaaaccttctcttaac
tacctctatcaccaggtcaagagtgattacatgcaacatatagctgatcaggtggatcaa
gatgttgctttgaaattgggctgtttggaaattaggaggttctttagagagatgcctggc
aacgccctggataagaaatccaactatgaactactagagaaagacgttggtttgagaagg
ttcttccccaaaagcctgctggactctcttaaggcaaagactcttcgtaagcagatccag
cagacctttaagcagtttgctaacctcaacgatgagcagagcatccacaaattcttcgag
atagtctctcccatctaccgcttcgacaaggagtgcttcaaatgtgctttagggtctagt
tgggtaatatcagtggagttagctatcggaccagaggaaggaatcagctacctcacagat
aagggctcaacgcctacacacttagctaactttaaccaggttcagtccatccagtactct
gctttggaagagaaggacaggaaaggcatgttgcagctcaacgtagcaggagctccagag
cctctcacagtcaccacggcatcgctgactacagcagaaaacatggctgacttgattgac
ggatactgtcggctcgtctcctcagctactcactccttcatcgtaagagtccacaaagag
ggggacagggctctgccttcaataccaaaagtttcaaatcatgagaagcggatggaaaaa
cggatggatggagtacggaccagagctgtgtgtgtctcaggtcacactagtggcgatgaa
acggacgactacgctgagatcatagatgaggaggacacctacaccatgccttcaaaatac
tatggactagatcaagcacgggactatgagattcagcgggatcgtattgagctgggacgc
tgcataggtgaagggcaatttggagacgttcaccaaggagtctacatcagcccggagaac
ccagctctgtctgtggcagtgaagacgtgtaagaactcaacgtcagacagcgtcagggaa
aagtttctccaagaagcattgaccatgcgtcagtttgaccatcctcacattgtgaagctg
atgggagttatcacagaaaatccagtctggattataatggagctctgcacacttggggag
ttgcggtcgtttctccaggtgaggaagtacagtctagacctggccactctcatcctgtac
tcgtaccagctcagcacggcattggcctatctggagagcaaacgctttgtacacagggac
attgcagcgcggaacgtgttagtgtctacagtcgactgtgtaaaactgggggactttggt
ctgtcgcgatacatggaagatagttcttactacaaagcatctaaaggtaaactgcctatt
aaatggatggctccagaatccatcaacttcagacgatttaccacagccagtgatgtctgg
atgtttggcgtctgtatgtgggagattctcatgtacggcatcaagcctttccagggtgtg
aagaataacgacgtcattggcaggatagagaacggcgagcggctggcgatgccccctcag
tgccctcctactctctacagcttgatgacaaagtgttggtcttatgatcccagcaagagg
ccgcgcttcaatgaactcaaaacacaactcagcactatattagaggaggagaaggtccag
cagaaggagaggaacaggatggagatgaggagacaggtcactgtgtcctgggactcagga
gggtctgatgaagcaccaccaaagccgagtagaccaggctatcccagtcctcgctcaagt
gaaggtttttaccctagtccccagcacccaggacactaccagatggcaggatatcccggc
cctcacaccctcccctccgtgcccagtgccctataccccccacaggcagcgatgctggac
acgcaccacgcgcacacacacccccgccaccacgtccacacgcactcgcatgcacagcac
cttccacagcctcatggacaggacatggtgctatggggctccgcgatggaggacagggca
gtagacatgcagcagtgtgtaggccagcagtgcctgttaatggaggaacagctgatgata
caacaacagcagatggaggaggatcagaggtggctggaacaggaggaaaggctgctgaaa
ccagacaccagaagttctcgagggagtctggacagagaagaaggtggacttcaaccacca
acaggaaaccagcacatataccagcccgttggcaaaccagagcatgcagctcccccaaag
aaaccccctcgacccggggctcagagccaggtgggcagtctggcctgtctaaataccgga
gacagttacaatgacggagtcaagcttcagccccaagagataagcccacctccaactgcc
aatctggaccgttctaatgataaggtgtacgagaacgtgacaggattggtcaaagctgtg
atcgagatgtcaagcaagattcagccagctcctcctgaggaatatgttcccatggtcaag
gatgtgggtctggcattgaggacgttactggccacagtggatgagacattaccacaactt
ccagccagcacacacagagagatcgagatggcacaaaagcttttgaactctgacttggca
gagctgattgggaagatgaagttagcccaacaatatgtgatgaccagtctccagcaggac
tataagaaacagatgctgacggcagctcacgctcttgccgtcgacgccaagaacctgctg
gatgtcatcgaccaatcccggctcaagatgatggcccagtcccgcccgcactag
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