Lates calcarifer (barramundi perch): 108889822
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Entry
108889822 CDS
T04895
Symbol
fam83ha
Name
(RefSeq) protein FAM83H
KO
K23931
protein FAM83H
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108889822 (fam83ha)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108889822 (fam83ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SACK1
PLDc_2
Motif
Other DBs
NCBI-GeneID:
108889822
NCBI-ProteinID:
XP_018541994
UniProt:
A0AAJ7PYJ2
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All DBs
Position
LG16_LG22:complement(2222814..2231629)
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AA seq
1623 aa
AA seq
DB search
MARRSQCSSAGDNPLDPNYLPPHYREEYRLAIDALIEEDLEGYYKFLQRVDVVDFLSTPE
IQYIQNSIQVPQQSHHHPEQRSLELGGDGSSDTYWPIHSDLDVPGLDLGWPQLHHFIGPT
EVTTLVNPPEPDMPSIKEQARRLIKNAQQVIAVVMDMFTDVDMFADILNAAARSVAVYIL
LDEQNAHHFVNMVSNCRVNLQSIQFLRVRTVSGITYHCRSGKSFKGQMMDRFLLTDCRAV
LSGNYSFMWSFEKLHRSMAHLFLGQLVSTFDEEFRILFAQSQPLMIENVLAPMEDLSLLS
KRQYPSERTSLFREPRKFLSMDTGHPEDMDWRMMPLKKQGSLHGPADMYGRFPPQQSRMD
PSFEQGPSRMLENPAFKRHSYAEGVHGRFSYPFLQQQGMPEPENQGRQFHRGQQPYPGPG
LGPETEYSGYDRFWNQGYHSADPYSEPGLPQDMQPPENFDHVYNYLSSTRNVDFDQSSEK
VPLAADLPFSSSHPRRLSLGQPYACQTSPTPSNPTEQKQFFQEPHTDRKDPTVKRGLRNW
RISSFLSAHDNPGDEGLPLVTPQAPDAFEEPLNPIPQTAPGVDLTYPKIPNVREFKVPAI
PRASQIPGYIKATVREQPKKLPDEPPAVTTETKTTPTPSESSSTAEGEKAEEAEEKEQKE
PKTSVLRREESFRRNYNPAAPRSSRLRSSLIFSSLEQQHGSQDSKTAPGQQDEESDKNEA
EQTKLPFVSQVLGQRRSAAREPFEWNRYMKSASATDVYKPDDGDSKADDKDLSKEENSKD
LSENREGKESLKPPDVEQNLSPSVPRSKPPEQPVQPPKPLFTTSYDMNDPDKRLMFFKEL
AAKRKAAKAAEAEKSKDKAPLKLPTDLKNTTAKKEEPEGKEGSEKMTTTSPSMGLSEKNV
TAGDAGKTASTEECKSVSLSLDAGDKTNKQDSLVKNESSIPQSCKEEQTGVSTDSEKIEL
KNSQPAISLPVTAETETPSSEPPEDLKPSKPAVKESSPSQPPAPTGATPDVPSLIQGTDE
SESPSHDPTSKESSSLISSSVEAPPSSAPAALDSNTQSPESEISISKPALLPEPQTGSEL
SSSNPSVQSSVSDHILSDSGSQVSPSPPTSSSAALSTPGETLSSDVTPEDSSSTLSSSIL
SPNSDKTEAQDSLLESSQTTDKPSAESESTQIDPDPISQLTSSETPSAVDSAHVESDISP
DKGAEPNTSSLQSTTNINSEESCAPTPVSENESVPKAVAEESEVPGSSEDVKADSTPPSP
SPSSPKSGLPNVSDLESSTSKPDQIETITVQPQPEHTQSETCSPVNPDVTSNASQSPTNA
SPQDAPTQATPPPELNLTTSVTPTPVETVSCSPPLTESVGSVLPPEAEKTERDTSTLCST
SDPTPPPEEITTDSNKTPTLPSTETSSPTEPTSKIPTEPEAIPESVTSESLPSEPPVPAE
NSKVDHQSDVIKEPELPDSGEKKSDDTEATNKVKKSATQESVTNKKTNDQVRQNNCTEPA
EVVPDEVVPLSPQTKQPKTGPSRYHSSTANVLSCSNLRDDTKLLLEQISANSQSRNEATK
ESPVTDDEKEDEADKNAKREKERGLKTFGRGPPKSTQEKEKLLERIQSMRKERKVYSRFE
MAP
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgctctcagtgttcctctgcaggggataaccccctggaccccaactacctc
cctcctcactatcgggaagagtaccgcttggctatcgacgcactgattgaggaggatttg
gaaggatactacaaattcctccaaagagtcgacgtggtggacttcctgtccacacctgag
attcagtacattcagaactccattcaggtccctcagcagagccaccaccaccctgagcaa
cgttctctggagctcgggggtgatggctcctcggatacttactggccgattcactccgac
ctggacgtcccaggtttggacctcggctggcctcagctgcatcacttcatcgggcccacg
gaggtcaccactctggtcaacccccctgagcccgacatgccgagtatcaaggagcaggcc
cgacgactcatcaagaatgctcagcaggtcattgctgtagtgatggatatgtttactgat
gttgacatgtttgcggacattctcaacgctgcagcgaggagcgtcgctgtctacattctt
ttagacgagcagaatgcacatcactttgtcaacatggtgtccaactgcagggtcaatcta
cagagcatccaatttttacgtgtgagaacagtgtctggcatcacgtatcactgccgctca
gggaaatccttcaaaggtcagatgatggatcggttcttgttgacagactgcagggctgtg
ctgagtggaaactacagcttcatgtggtcttttgagaagctccaccgctccatggctcac
cttttcctaggacagctcgtatcgacttttgacgaagagtttcggattctctttgctcag
tcccagccactgatgattgaaaatgtgcttgctccaatggaagatttaagccttctgtca
aagaggcagtacccaagtgaaagaacttcactgttcagggagcccaggaaatttctatca
atggacaccggtcatccagaggacatggattggagaatgatgccccttaaaaagcaagga
tccctgcacggccctgcagatatgtacggtagatttcccccccagcagtctcgcatggat
ccgtcttttgagcagggcccctccaggatgctggaaaatcctgcctttaaacgtcacagt
tacgctgaaggtgttcatggtagattctcgtacccgttcctgcagcaacagggaatgcca
gagcctgagaaccagggacggcagtttcacagagggcagcagccctatccagggcctgga
ctaggaccagaaacagagtacagtggctatgacaggttctggaaccaaggctatcattca
gcagatccatactctgaacctggtttaccacaagacatgcaaccacctgaaaactttgac
catgtgtataactatttatcatctaccagaaatgtggactttgaccagagctcagagaaa
gtaccacttgcagcagatttaccatttagttcatctcatccaagaagactgagtttaggc
cagccatatgcctgtcaaacctctcccaccccctcaaatccaaccgaacaaaagcagttt
ttccaggagcctcacactgaccgcaaagatcctacagtgaaacgagggctgagaaactgg
aggattagctcattcctcagtgcgcatgataatccaggagatgaaggcctgccattggta
acacctcaggcaccagacgcttttgaagagcccttgaaccccataccgcaaacagcaccg
ggagtagatttaacatatcctaaaatccccaatgtcagggagtttaaggttcctgcaata
cccagggcaagtcagattccaggttatatcaaagccactgtacgagagcaaccaaagaaa
ttgcctgatgaacctcctgcagtgacaacagaaactaaaacaacaccgacaccttcagag
tcgtcatccacagctgaaggggaaaaggcagaggaagcagaagaaaaagaacagaaagaa
ccaaaaacctctgttcttcgcagggaggagtcgttccgtaggaattacaatcctgccgct
ccaaggagctccagattaagatcttctctgatattcagctctcttgagcagcagcatggc
tctcaagatagcaaaactgccccaggccaacaggatgaggaaagtgacaaaaatgaggca
gaacagacgaaactaccttttgtttcacaggttctaggacaaaggcgatctgctgcaaga
gagccttttgaatggaaccgttacatgaagtcagcttcagccacagacgtgtacaaacca
gatgatggagatagtaaagcagatgataaagatctatcaaaggaagaaaattcaaaggat
ctttcagaaaaccgtgagggaaaggagtcattaaaaccgccagatgtagagcaaaatttg
tcaccatcagtgcccagatccaagcctcctgaacaaccagtgcaaccacccaagcctttg
ttcaccacttcatatgatatgaatgatcctgataagaggctcatgtttttcaaagagttg
gcagcgaaacgcaaggcagctaaggctgcagaagctgaaaagagcaaagacaaggctcca
ttgaaactgccaactgatctaaaaaacaccactgctaaaaaggaggaacctgaaggaaag
gaaggttcagaaaagatgaccactacttccccatctatgggtttatctgaaaaaaatgtt
actgcaggtgatgcagggaaaacagcgtccactgaagaatgcaagtcagtcagtctatct
ttagatgctggtgataagacaaacaagcaggacagtcttgtcaaaaatgagtcaagtatc
ccccaaagttgtaaagaggaacaaactggagtttcaactgattcagagaagatagagctg
aaaaacagccaaccagcaatatctctgcctgttactgcagaaacagaaactccttcaagt
gaacctcctgaggatctaaagccgtcaaaacctgctgtaaaagagagtagcccaagtcaa
ccacctgcaccaacaggtgctactcctgatgtcccttctcttatacaaggtactgatgaa
agtgaaagcccaagccatgatcccacctcaaaggagtccagttcgctcatttccagttca
gtggaggcaccaccatcttctgcacctgctgcattggattctaacacccaaagtcctgaa
tcagaaatcagcatctccaaacctgccctgctgcctgaaccacagactggatcagaattg
agctcttctaacccatcggttcaaagctctgtctctgatcacattctgtcagattctggt
tcacaggtcagtccaagtcctccaacctctagctctgctgctctttccactcctggagag
actttatcttctgatgttaccccagaagactccagctcaaccctgtcctccagcatattg
tctccaaattctgataaaacagaagcacaggactcactacttgagtcctcccaaacaact
gacaaaccttctgcagaatctgagtctacccagattgatccagatcctatttcccagttg
acgtcatccgagaccccttcagcagtcgactctgcacatgtggaatctgatatttctcct
gacaaaggtgctgaaccaaacacatcctcattacagtcaaccacaaatataaactctgaa
gaatcttgtgctcctacacctgtatcagaaaatgagtctgttcccaaggctgttgcagag
gaatctgaggttcctggatcatcagaggatgttaaagctgatagcacacctcctagtcct
agcccttcatcacccaagtcaggtttacctaatgtgtctgatctggaaagttctacttcc
aaacctgatcagattgagaccattactgtccaaccccagcctgagcatacccaatcagaa
acatgctctcctgtcaatccagacgttacttctaatgcttcacagtccccaacaaatgca
tctccacaagatgcaccaacacaagcaacccctccccctgaacttaaccttactacatct
gtcactcccactcctgttgaaactgtgtcatgttcccctcctctaactgagtcggttgga
tcagttttgccccctgaggctgaaaaaacagaaagagacacgtcgacattgtgcagcacc
tcagatccaacccctcctcctgaggagattacaacagactcaaacaaaactccaacgctc
ccatcaacagaaacttctagtccaactgagcctacctcaaaaatcccaacagagccagag
gctatacctgagtctgtgacttctgaaagcctgccttcagagccacctgtacctgctgaa
aatagtaaagtagaccatcagagtgacgtaatcaaagagccagaattgcctgactctggt
gagaaaaaatctgatgatactgaggccacaaataaggtcaagaaaagtgctacgcaggaa
tctgtcacaaataaaaaaacaaatgaccaagtaagacaaaataactgcaccgaaccagca
gaggtcgtaccggatgaagtcgttcctctgtcgccgcagaccaagcagccgaaaacaggc
ccgtcccgctaccactcatctacagccaacgtgctctcgtgcagcaacctcagagacgat
acaaagctgcttctagagcagatttccgccaacagccagagcaggaacgaggctaccaaa
gagtctcccgtcaccgatgacgagaaggaggacgaggctgacaaaaacgccaaaagggag
aaagagagagggctcaagacatttggcagagggccgcccaagtcgacgcaggagaaggag
aagctgctggagaggatccagagcatgaggaaggagaggaaagtttacagtcgatttgag
atggcaccttag
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