Lates calcarifer (barramundi perch): 108889904
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Entry
108889904 CDS
T04895
Name
(RefSeq) integrator complex subunit 3 isoform X1
KO
K13140
integrator complex subunit 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108889904
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108889904
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
108889904
NCBI-ProteinID:
XP_018542112
UniProt:
A0AAJ7PYP6
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Position
LG3:23286833..23295897
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AA seq
1019 aa
AA seq
DB search
MEPAPAKAKPQGRLLVSTPLDAKDELEERLERCVGIVQSLTNGLSEREANDALTANVCKG
QQQHEEVCLGLFTLVLTEPAQAQRCYRDLTLVNRDGMNVVLVKINQILMEKFLKLQDVPR
TQLVWLVRELVKSGVMGADGVVMTLLKQIAGGDISTKNLWLAESVLDILLEQKEWVLKSG
MLIAMSVYTYLRLIVDHGAPNLLPLRQKEVDFCISMLREKFMECLIIGRDLVRLLQNVAR
IPEMELLWRDLLHNPQVLSPQFTGVLQLLTARTSRKFLACRLTPDMETKLLFMTSRVRFG
QQKRYQDWFQRQYLSTAESQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTCT
SNVAASNAKLALFYDWLFFNPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPH
FFPPLESQVRQGVFNSLTFIMEKRVLAHLAPLFDNPKLDRELRSMLRERFPEFCSSPSPP
TEVKMEEAVSMDMDNHVLDKEEGCYDNTEAAFSDDEEEVNNKGKKREFRFHPIKEAVMEE
PADITPWLDQLDDTMKEKVLQLQKTSDTETQCEVMQEIVDLILEEDFDTEQMSALASCLA
ELFKDHFRGDVLPEEITEESLEESVCKPVCLIFRNLVTMQEDNSGFSVLLDMLAELYQKQ
PKIGYHLLYYLKASKAANGKMMLYESFAQATALGDLHTCLMMDMKACQEDDVRLLCYLTP
SIYSEFPDETLRSGELLNMIVAVIDSTQLQELMCHVMMGNLVMFRKDSVLNILIQSLDWE
TFEQYSTWQLFLAHSIPLETIIPILQHLKYKEHPEALSCLLLQLRREKPSEEMVKMVLSR
PCHPEDQFTTSILRHWASKYDDTLGEHIKAQLIKNNNQPRKRQSLRSSSSKLAQLTLEQI
LEHMDNLRLSLSNTKNNFFTQTPILQALQHVQASCDEAHKMRFSDLFALAEEYEDSQSKP
PKSRRKAPASSPRSRKGAAPPTNNEEESASSSASEEEDSKPKAPKRKRKGSSAVGSDSD
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcaccggcgaaggcgaagccgcagggccggctactggtgtccaccccgctg
gacgctaaagacgagctggaagagagactggagcgttgtgtcgggatcgtccagtcgttg
accaatgggctgtcagagagagaagccaacgacgcgctcactgcgaatgtgtgtaaaggt
cagcagcagcatgaggaggtgtgtctgggtctgttcactctggtcctcacagagccggcc
caggcccagaggtgttacagagacctgacgctggtcaacagagacgggatgaatgtggtt
ctggtgaagatcaaccagatcctgatggagaagttcctcaaactgcaggatgtccccagg
actcagctggtgtggctggtcagagaactggtgaagagcggggtgatgggagctgacgga
gtcgtcatgacgctgctgaaacagatcgcaggtggagacatctccaccaagaacctgtgg
ctggccgagagcgtcctcgacatcctgctggagcagaaggagtgggtgttgaagagcggg
atgctgatagcgatgtcagtctacacctaccttcgtctgatcgtggaccatggagctccg
aacctgctgccgctccgtcagaaggaggtggacttctgcatcagcatgctgagggagaag
ttcatggagtgtctgatcattggcagagatttggttcgtctgctgcagaacgtcgctcgg
atcccagagatggagctgctgtggagagacctgctgcacaacccacaagtcctcagtcct
cagttcaccggtgtcctccagctgctgacagctcggacctctaggaagttcctggcctgt
cgactaaccccggacatggagaccaagctgctgttcatgacctccagggtgcgttttggg
cagcagaagcggtatcaggactggttccagagacagtacctgtccacggcggagagccag
tctctgcgctgcgatctgattcgctacatctgtggagtggtccatccgtccaatgaggtg
ctgagctctgacatcctgcctcgctgggccattattggctggctgctcaccacctgcacg
tctaatgtggccgcttccaacgccaagctggctctgttctatgattggttgttcttcaac
ccagagaaagacagcatcatgaacatagaacctgccatcctggtgatgcatcactccatg
aagcctcatcctgccatcaccgctaccctgctcgacttcatgtgccggatcatccctcac
ttctttcctccattagagtctcaggtgcgtcagggcgtcttcaactcactcaccttcatc
atggagaagagagtgctggctcacctcgctccgttgtttgataatccaaagttggaccga
gagcttcgatcaatgctcagagagagattccctgagttctgcagctcgccctcccccccc
actgaggtgaaaatggaggaggctgtttccatggatatggacaaccatgtgttggacaag
gaggagggttgctatgacaacacagaggccgccttcagtgacgatgaggaggaggtcaac
aacaaaggaaagaaacgagagttcaggttccatccaatcaaagaggcggtaatggaggag
cctgctgacatcacaccctggctggaccaattagacgacaccatgaaagagaaggtgctg
cagctgcagaaaaccagtgacacagagactcagtgtgaggtgatgcaggagatcgtggat
ctgatcctggaggaggactttgacacagagcagatgtcggctcttgcttcctgtttggcc
gaactgttcaaagatcacttcagaggagacgtcctaccagaggagatcactgaggagtcc
ctggaggagtcggtgtgtaaacccgtctgtttgatcttcaggaacctggtgacgatgcag
gaggataacagcggcttctcagtgctgctcgacatgttggccgagctttaccagaaacag
cctaagatcggataccacctgctctactacctcaaagccagtaaagcggcgaacgggaag
atgatgctgtacgagtcattcgctcaggcgacggcgctcggcgacctgcacacctgtctg
atgatggatatgaaggcgtgtcaggaggacgacgtccggctgctctgctacctcaccccc
tccatctactctgagtttccagatgagacgttgagaagcggtgagctgctcaacatgatc
gtcgccgtcattgactccacacagttacaggagctgatgtgtcatgtgatgatgggcaac
ctggtgatgttcaggaaggactctgtgctcaacatcctcatacagtctctggactgggag
acctttgagcagtacagcacctggcagctgttcctggctcacagcatccctctggagacc
atcatccccatcctgcagcacctcaaatacaaagagcatccagaggccttatcctgtctg
ctgctgcagctccgcagagagaagcccagtgaggagatggtgaagatggtcctgagtcga
ccctgtcaccctgaggaccagttcaccaccagcatcctgagacactgggcatccaaatat
gacgacacgctgggagaacacatcaaggcccagctgatcaagaacaacaaccagccccgc
aagagacagagtcttcgtagctccagcagtaaactggctcagctgaccctggaacagatc
ctggagcacatggacaacctgagactgagtctgagcaacaccaagaacaacttcttcact
cagactccgatccttcaggctctgcagcacgttcaggccagctgtgatgaggctcacaag
atgaggttcagtgacctgttcgctctggctgaggagtacgaggactctcagtccaaacct
cccaagtcgcgccgtaaagctccagcatcgtctccgcgctccagaaagggagcagctcca
cccaccaacaacgaggaggagagcgcctccagcagcgcctcggaggaggaggactcgaag
cccaaagctccaaagaggaagaggaaaggctcgtcagccgtcggctccgatagcgactga
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