Lates calcarifer (barramundi perch): 108890052
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Entry
108890052 CDS
T04895
Symbol
asb2a.1
Name
(RefSeq) ankyrin repeat and SOCS box protein 2
KO
K10324
ankyrin repeat and SOCS box protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108890052 (asb2a.1)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108890052 (asb2a.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
SOCS_box
ANK_LRRK2
DUF7855
Nitro_FeMo-Co
Motif
Other DBs
NCBI-GeneID:
108890052
NCBI-ProteinID:
XP_018542331
UniProt:
A0A4W6EHT4
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Position
LG7_1:complement(33648..42410)
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AA seq
685 aa
AA seq
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MAAASISQSGSAAPSLSFEDYSIYSNLSDDELLQLAVERSLTDTHCANTNPTSNTTSNAT
GNTAAAAATPLHCQPTARNTNQPNLSFHNPAPAQTTAHYSSPNPPTEKPPDPKTFDGTIS
RFMTGSGKRMVAYRRPDGSLVHIAPEPEEEEEPLFKAIRVGDASRVKALVMHPGTNLMLP
SKPGWLAIHEAAWYGQDTCLRVLLSAQPGMINKRTDRGETALLVAVSKDQQQCAQVLLGN
GADPDIPNYEKETPLYKACERNSAAMVAMLLNHGAVVNTPCILGWTALQEAVVRNNVEIC
EMLVKAGAKHNLTNMYGISALFSAAQTGQVAALRFLLKHGADVNSQAADGATALYEAAKN
GHEEIVELLLSQNADANKPGKTGLLPLHIAAQRGSDTIVSMLIPATSKARVRRTGISPLH
LAAERNRDNVLEALIEAGFDVNAQLSEDRSKLYEDRRSTALYFSVINNNIDATRMLLAAG
ANPNLDVFKPLMVAARQGCIQTITLLVEHGADINAGIPTHPTTFPAVYMFSMKYLPMFKY
LLDHGGHALSCFDCVYGNRPHPPIKTTRSQRNDDSRVLTESQLRRGVQFCEMISAPSICR
WAGPIIDVLLDYVGHVTLCSRLVEHLDSYSDWSVIKEKAAPPRPLMQLCRLQILQLVGRR
RIKRLPLPGGLIRFLQHQEKLLDDM
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagccagcatctctcagtctggctcagcagctcccagtctgagctttgaggat
tattctatctacagtaacctgagtgatgacgaactgctgcagctcgctgttgaacgcagt
ctgactgacacgcactgtgccaacaccaacccaaccagcaacacaaccagcaacgcaacc
ggcaatacagctgctgccgctgccacacctcttcactgccaacctacagccagaaacacc
aaccaacccaatctcagcttccataatccagctcctgcccagaccactgcacactacagt
tctccaaaccctccgactgaaaagcctcctgatccgaagacgtttgatgggacaatcagt
cgcttcatgacaggttctggaaagaggatggtggcttatcgcagacctgatggcagtctg
gtccacatcgctccagagcctgaagaggaggaggagcctctgttcaaagcgatccgtgtt
ggagatgcgagcagagtgaaagcgttagtgatgcatccgggaaccaacctgatgctgccg
agtaaaccgggctggctcgccattcatgaggcggcatggtatggccaggacacctgtctg
agagtcttgctgtcagctcagcctgggatgatcaacaagcgaacagaccgcggtgagacg
gcgctgctggttgctgtcagcaaagaccagcaacaatgtgctcaggtgctgctgggaaac
ggagctgaccctgatatcccaaactacgaaaaagagactccgctttataaagcatgtgag
aggaacagtgctgcaatggtggcgatgttgctgaaccatggagcggtggtgaacactcct
tgtattctgggttggaccgcactgcaggaggctgtggttcgaaacaatgtggagatctgt
gagatgcttgtgaaggccggagccaaacacaacctcaccaacatgtacggcatctcagcg
ttgttcagtgcagctcagaccgggcaggttgctgccctgcgtttcctccttaaacatggt
gcagatgtcaacagtcaggctgctgatggagccactgctctgtatgaagccgctaaaaat
ggacatgaggaaattgtggagctcctcctctcacaaaatgcagatgccaacaaaccagga
aaaaccggattattaccacttcacattgctgcccagagaggaagtgacactattgtctcc
atgttgatcccagccaccagtaaggccagagtccggcggaccggcatcagcccactccac
ctggcagcggagcgtaaccgtgacaatgtgctggaggctttgattgaggcgggcttcgac
gtcaacgctcagctgtctgaagacaggtcgaagctgtatgaggaccgccgcagcacggcg
ctctacttctccgtcatcaataacaacattgacgccacgcgcatgctcctggcggctggc
gccaacccgaacctggatgtgtttaagccgctgatggtggcggcaaggcagggctgcatc
cagactatcaccttgctggtggagcatggagctgacattaatgccggcatccccacccac
cccaccaccttccctgctgtctacatgttctccatgaagtacctgcccatgttcaagtac
ctgctagaccacggaggccacgccctctcctgcttcgactgtgtctatggcaaccgacct
catccaccgatcaaaaccacccgatcacagaggaacgacgatagtagagtcctgacagag
tcccagctgaggagaggcgttcagttctgtgagatgatctcagcccccagtatctgtcgg
tgggcggggccaatcattgatgttctattggactacgttggtcatgtgactctctgctcc
agactggtagaacaccttgacagttactctgactggagtgtcatcaaggagaaggcagct
cccccgcggcccctcatgcagctctgcaggctgcagattctgcagcttgttggacgtcga
cgtataaagaggttacctctgcctggaggtctgatccgcttcctgcagcaccaggagaaa
ctgcttgatgacatgtaa
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