KEGG   Lates calcarifer (barramundi perch): 108890469
Entry
108890469         CDS       T04895                                 
Name
(RefSeq) mamu class II histocompatibility antigen, DR alpha chain
  KO
K06752  MHC class II antigen
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04514  Cell adhesion molecules
lcf04672  Intestinal immune network for IgA production
lcf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108890469
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108890469
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    108890469
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108890469
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108890469
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108890469
  Exosomal proteins of epithelial cells
   108890469
  Exosomal proteins of breast milk
   108890469
SSDB
Motif
Pfam: C1-set MHC_II_alpha C2-set_2 Ig_2 Ig_3 I-set ig C2-set_3 SusE DUF4034
Other DBs
NCBI-GeneID: 108890469
NCBI-ProteinID: XP_018542858
UniProt: A0AAJ7PZQ8
LinkDB
Position
Unknown
AA seq 233 aa
MCCDWLLCQSPDRVSESVLLLPLRGKVMMMMMVMKVSGLLLILSCVSADSLHEDLSISGC
SDTDGEQMFSLDGEELWFADFINKRGVEPQPSFIDHISYQEGTYEAAEADQQICRQNLKI
LRQVNKDVPLELDPPSVPNIYTRNHMLHGEKNILICHVSGFYPAPVNVSWTKNGVNVTEG
TSINVPFPNKDGSFTQISRLEFIPQLGDIYTCTVTHPALNQPLTRIWDVVYLQ
NT seq 702 nt   +upstreamnt  +downstreamnt
atgtgctgtgattggctgctgtgtcagtcccctgacagagtctcagagtcagtcctgctg
ctgccgctgaggggtaaggtgatgatgatgatgatggtgatgaaggtgtcggggctgctc
ctcatcctctcctgtgtctctgctgacagtctccatgaggacctcagtatcagcggctgc
tctgacactgatggagagcagatgttctctctggatggtgaagagctgtggttcgcagac
ttcatcaacaagagaggagtcgagcctcagcccagttttattgatcatatcagctaccag
gagggaacttatgaagcagctgaggctgatcagcagatctgcagacagaacctgaaaata
ctacgtcaagtcaacaaggacgttccactggagctcgatccaccgagcgtcccgaacatc
tacaccagaaaccacatgctgcatggagagaagaacatcctgatctgtcatgtgtctggc
ttctatcctgctcctgtcaacgtctcctggaccaagaacggagtgaacgtgactgaagga
accagcatcaacgtcccctttccaaacaaagatggttccttcactcagatctccagactg
gagttcatcccacagctgggagacatctacacctgtacagtgacacatccagctctgaac
caaccactgaccagaatctgggatgttgtgtacctgcagtag

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