KEGG   Lates calcarifer (barramundi perch): 108890709
Entry
108890709         CDS       T04895                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108890709
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108890709
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108890709
  Multi subunit type E3
   KPC complex
    108890709
SSDB
Motif
Pfam: TPR_RNF123 SPRY zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 108890709
NCBI-ProteinID: XP_018543208
UniProt: A0AAJ7Q0E8
LinkDB
Position
LG12:241795..315288
AA seq 1332 aa
MSSKGGGTALTRRNYRLSSDTDKPRATGIVNEKLLSDYLHHVFPSTKAQGPAVASLRKTL
GFQDLGAHLERLLSEGEASEDSRDQPVEGRLGPQPVVLDHTSGFEGLLFVDDDLLGVIGH
SNFSSIRATTCVYKGKWAYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRV
RKWNVTTTNYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGTAFTNIKMGPGVAYFPAIS
LSFKESVAFNFGSRPLRYPVDGYLPLQNPPSADLTKAHKLLGYIKNVLSTSIDTQEDRLL
EKDCALWRLHGEPTVLIALAHIFNHFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPLI
QQLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILHHEKSR
KYLLNNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTHFDKEGKDERDPKDESAD
ERLRRRAYERGCQRLKKRIEVVEELQVQILRLLLNNKDKTTGEASRYIFLNKFRKFLQEN
ASNRGHPTALCPPEYMVCFLHRLITAVRSCWDEGNRKSPGSVNSEEAYVPPQLFYNGKVD
YFDLQRLGGLLSHLKKTLKDDLASKANIIIDPAEIQATSMDDLDEDEESGAAQRPFGAAA
MGGALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLTQPEKVKIRTLTVEQRTEEDIEG
SHGNDGLLLGRPLEEPDQPIADKSLLEIIDGIVMMYNLSVHQQLGKMVVVSDDVHEYAVA
LKDTEEKIARCPARRADILEELQKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDVYWLL
CVCIRTIEHADNTGSLFAFAPEFYLNVAMNAYSALKNYFSPANSMEELPGYEETLTQLAA
ILAKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQRVAMMRNLLAPYEQRP
WAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLLLQRHMAELLSMD
KDMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLL
RVLEMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAEKNLFDRVVNLRLPGLES
VDHYPILVAVTGILVRILVDGDRQGISRAASVLLSDPCFQLHSIQHLLGEGGDSSSSSAA
VAPAARPVVGSLGSSVAPPIPSAAGTAGSSERKHFSLHSYTDYISEDEKQKVELMLAFLT
EESKQAAASTAPTSEEDLCPICYAHSISAIFKPCSHKSCKACINQHLMNNKDCFFCKATI
TGVEDYSKPASS
NT seq 3999 nt   +upstreamnt  +downstreamnt
atgagctctaaaggggggggcacggctctgacccgccgtaactacagactgtcctcagac
acagacaaacccagagctacaggtatagtgaatgagaagctgctcagtgattacctgcat
catgtgtttccttcaaccaaagcgcagggacctgcagtggcctccctcaggaagactctt
ggtttccaggacctgggtgctcacctggagagactcctgtctgagggagaagccagcgag
gacagcagagatcagcccgttgaaggtcgtctgggtcctcagcccgtcgtcctcgatcac
accagtgggtttgaaggcctcctgtttgtagatgacgacctgctgggggtcatcggccac
agcaacttcagctccatcagagccaccacctgtgtttacaaagggaagtgggcgtacgag
gttctgatctcctcccagggtctgatgcagatcggctggtgtactctgaactgtcgcttc
aaccaggaggagggagtgggggacacgcctgattcttacgcctatgatggaaacagagtc
aggaagtggaacgtgacgaccaccaactatgggaagtcgtgggctgcaggagacatcgtc
agctgcctgatagacctggacgagggaacaatcactttctgcctgaacggccagtctctg
ggcacggctttcaccaacattaagatgggtccaggtgtagcgtactttcctgccatcagc
ctctccttcaaagagtcggtggcctttaactttggcagcagacctctcaggtaccctgtg
gacgggtacctgcccctgcagaaccccccctctgcagacctgaccaaggctcacaaactg
ctgggctacatcaagaatgtcctgtccaccagcatcgacacacaggaggacaggctgctg
gagaaggactgtgccttgtggaggcttcatggagaaccaacagtcctcatcgctctggct
cacatcttcaaccactttgctcctctcatgtgtaaagtgtacctggtggaggacgttctg
atgaacttcctgttggggattctggagggaggaggttcagtggacgaacacccgctcata
cagcagctcctggatctgttctggctgctgatggaggactatgaagtgaacgagtgtctg
aagcagctgatgatgtccttgctcagagcttatcgcttctcccccatcatccctgacctg
ggcttccagatccattacctgcgtctgaccacagccatcctgcatcatgagaagtccagg
aaatacctgctcaacaacgtcttgtttgacgtcctgcgttcagtcgtgtttttttacatc
aagactcctctgagggtgaaggaggcggggttagaggagctcatccccaccacctggtgg
cccacgcacttcgacaaggagggtaaagacgagcgagaccctaaagatgagagtgcagat
gaacgtctgaggcgtcgagcgtatgagagaggctgtcagagactgaagaagaggatcgaa
gtggtggaggagttacaggttcaaatcctgaggctgctgctcaataacaaagacaagacg
acgggagaagcttctcgctacattttcctcaataagttcaggaagtttctccaggaaaac
gccagcaacagagggcaccccacagctctgtgtcctccagagtacatggtgtgtttcctc
caccgcctcatcacggccgtgaggagctgctgggacgaagggaacaggaagagtccaggc
agcgtcaacagtgaagaggcctatgtccccccccagctcttctacaatgggaaggtggat
tactttgacctgcagagactgggggggcttctgtcccatctaaagaaaacactcaaagat
gacttggccagtaaggccaacatcatcatcgaccctgcagagatccaggccacgtctatg
gacgacctggacgaggacgaggagagcggagcagcacagaggccgttcggcgcagcagcg
atgggcggagctctggcgaggcccagctggttgagttctcccactctgggtcgagccaac
cggttcctgagcacggccgccgtcagtctgatgacccccagacgacccctgacccagcca
gagaaggtgaagatccgaaccctgactgtggagcagaggactgaggaggacatcgagggt
agccacggtaatgacggcctgttgctggggcgaccgctggaggagcccgatcagccgatc
gcagacaagtctctgctggagatcatcgacgggatcgtcatgatgtacaacctgagtgtt
catcagcagctggggaagatggtggtggtttcagacgacgtccatgagtacgctgtggct
ctgaaggacacggaggagaagatcgctcgatgtcctgcccggagagcagacatcctggag
gagctccagaaaagccagaaggtgtttgcagagaagctgaaccacctgagcaggagactg
gcctggatcaatgccaccatctactccaaggagaagatgctggacgtgtactggctgctg
tgcgtctgtattcggaccatcgaacacgccgacaacacgggctccctgttcgccttcgct
ccagagttctacctcaatgtcgccatgaacgcttacagcgccctcaagaactacttcagc
cccgcaaacagcatggaggagctgccaggatacgaagaaacattgactcagctggctgcc
atcctcgccaagcacttcgctgacccacgcatcgtcggcacagatatcaaagactctctg
atgcaggccctggccagctacgtctgctacccacaatccctcagggcagtggagcggatc
ccagaggagcaacgtgtggccatgatgaggaacctgttggctccgtatgaacagagaccc
tgggctcagaccaactggatcctggtcagactctggaggggctgtgggtttggatacaga
tacactcgccttcctcacctgctgaaaaccaaacctgaggacgccaacctgcccagcctg
cagaagccgtgtccgtcgttgctgctgcagagacacatggcggagctgctgagcatggac
aaagacatggccgcctccttcctcaacagcgtcctaaaccagctcaactgggctttctcc
gagttcatcggcatgatccaggagatccaacaggctgcagaacgtccagagagaaacttt
gtggacactcgacagctgaaggtgtgtgcgacctgcttcgacctgtccgtcagtctgctg
cgtgtcctggagatgaccgtcactctggtccctgagatcttcctggactggtccagaccc
tctgcagagctgctcctcagacgactggctcagctgttgaaccaggtgttaaaccgagtg
acggcagagaagaacctgttcgaccgagtcgtcaacttaagactgccaggtctggagtct
gtagaccactacccgatcctggtcgctgttacagggatcctggttcgaatcctggtggat
ggagacagacaggggatatctcgagctgcctccgtcctgctctctgacccttgtttccag
ctccactccatccagcacctgttaggagaggggggggactcctccagctcctcggcagcc
gtcgcccccgccgcccggcccgtggtcgggtcgctggggtcgtcggtggcccctcccatc
ccgtcagccgctggaaccgcaggctcttcagagaggaaacacttctccctgcactcatac
acagactacatcagtgaggatgagaaacagaaggtggagctgatgttggcgtttctcaca
gaagagtccaaacaggccgcagccagcacagctccaaccagtgaagaagacctctgcccc
atctgctacgctcactccatctctgccatcttcaaaccctgctcacacaagtcctgcaaa
gcctgtatcaaccagcacctgatgaacaacaaggactgtttcttctgcaaagccaccatc
accggggtcgaagactacagcaagcccgcctcctcctaa

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