Lates calcarifer (barramundi perch): 108891047
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Entry
108891047 CDS
T04895
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108891047 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108891047 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108891047 (iars1)
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108891047 (iars1)
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108891047 (iars1)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108891047 (iars1)
Prokaryotic type
Other AARSs
108891047 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
PriX
Motif
Other DBs
NCBI-GeneID:
108891047
NCBI-ProteinID:
XP_050930453
UniProt:
A0AAJ8BCE6
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All DBs
Position
LG12:complement(25696915..25780669)
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AA seq
1142 aa
AA seq
DB search
MVEPVPESINFPSEEEKILQFWGEKDCFQECLRQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWETSVKRMGRWIDFNNDYKTLYPWFMETVWWVFRQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLVDNQDVALIAWTTTPWTLPSNLALCVNP
EFLYVQVKDNTTGKTYIMMEARLGALFKSEGEYTLLDKFPGKTLKGKKYKPLFQYFAKCG
EKGAFQVVTDNYVKEEEGTGVVHQAPYFGADDYRVCTEYNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKENGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLDNNGKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGVKVTDLHRESIDSLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQVHY
PFENRKEFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIQFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDSSSIHYLMLPQVRESLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDAEALKDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKSVTASIKELTSEQLEAFQKTGSIVVDGHELHEEDLRLMYTFNQSSDSAAQ
YEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCQPEGE
YLDSVIQAHTDFILATTKAPLLPFPVPKTASVIIEEKTQLKGSDLELTIVKGSSAPRAPL
SGPACTYVNLRVKVNNKEQEGVVLLENPKGDNRLDVDKLRKVCSSIFGTNNTQLRFFNRR
GW
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagtccctgagtccatcaactttccctcggaggaggagaagatcctgcag
ttttggggagagaaggactgcttccaggaatgcctcagacagtccaagaacaggcctaag
tacaccttctacgacggccctccctttgccacgggtttaccccactacggtcacatccta
gccggcaccatcaaggacattgttactcgctttgcccaccagagcggcttccatgtggac
cggcgctttggctgggactgtcacggcctgcctgtggagtatgagattgacaagacactg
gggatcaaagggcctgaagatgtggccaagatgggcattgctgagtacaacaagcagtgc
agaaacattgtgatgagatactccaacgagtgggagacttcagtgaagcgaatgggccgg
tggattgacttcaacaatgactacaagacgctctacccgtggttcatggagactgtctgg
tgggtgttcagacagctgtatgacaagggtctggtgtaccgaggtgtcaaagtcatgcct
ttctccaccgcctgcaacacccctctctccaacttcgagtcccaccagaactacaaggat
gttcaggatccatctgtgatcgtcaacttcccgctggtcgacaatcaagatgttgctttg
attgcctggacgaccacaccctggacactgccgagcaacctcgccctctgtgtgaacccg
gagttcctctatgtccaggtgaaagataacaccacaggcaagacctacatcatgatggag
gccaggctgggagctctgtttaagtcagagggcgagtacactctgctggacaaatttcct
ggcaagacacttaaagggaaaaaatacaagcctctcttccagtactttgccaagtgtggg
gagaagggagcgttccaggtggtgacggataactacgtcaaggaggaagagggcaccgga
gtggtccaccaggcaccttactttggagctgatgattacagggtgtgcactgaatacaac
atcatccagagggaccaggctcctatctgccctgtggacgcctcaggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagacgctgacaagaacatcatcaagtgg
ctgaaggagaacggccgcctcgtcaatgccagcagcttcaaacatagttaccccttctgc
tggaggtccgacacgcctctgatctacaaagcggtgcccagctggtttgtccgagtggag
cacatggtggacaaactgctggacaacaatggaaaatgctactgggttccagagtttgtg
cgtgagaagcgtttcgggaactggctgagagacgcacgcgactgggcgatttcgaggaac
cgttactggggcacgccaatccctctctgggtcagcgacgacttcgaggaggtggtgtgt
gtagggtccatggccgaactggaggagctgaccggagtcaaagtaactgatctgcatcgg
gagagcattgacagtctgaccatcccgtcgcggtgtgggaagggcgtgctgcggagggtc
accgaggtgttcgactgctggttcgagagcggcagcatgccctacgcccaggtccactac
cccttcgaaaacaggaaggagtttgaggacgctttccccgcagacttcatcgccgaaggc
attgaccagacgaggggatggttctacaccctgttggtgctctccacagccctgtttggc
aaaccacccttcaagaatgtcatcgttaatggtttggttcttgctagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccgggactgatagtgcagaactatggagct
gatgccctcaggctctacctcatcaactctcctgtagtgagagctgagaacctgcgtttc
aaagaggagggggtgcgggacgtgttgaaggatgtcttcctgccgtggtataatgcctat
cgcttcctggtgcagaacgtacagaggttacagaaggaggatgagattcagtttctgtac
aacgagaacacggcgaagcagagtgacaacatcatggacaaatggattcagtccttcaca
cagtccctcattcagttcttcaaggctgagatggatgcctaccgcctctacactgtcgtg
cctcgcctggtcaagtttgtggacatgctcaccaactggtacgtcaggaccaacagacgc
cgtctgaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctcccttcacacccttcattacagagatgatg
taccaaaatctgcgtcacctcatcgaccccgcctctgtcgaggagaaggacagcagcagc
atccactatctcatgcttccccaagtcagggagagtttgattgacaagcgcattgagagc
gctgtttctcagatgcagtctgtgattgagctgggcagagtgatccgagacaggaagacc
ctgcccgtcaagtacccattgaaggaggtggtcgttattcaccaggatgcagaggctctg
aaagacatccagtccctgcagaaatacatcctggaagagcttaatgtgaggcagttaacg
ctgtcaacggacaaggacaagtacggcatccgtctgagagccgagccagaccacatggtt
ctgggcaagagactaaagggggccttcaaatccgtcactgcctctatcaaggagctcacc
agcgaacagctagaggccttccagaagacaggctccatcgtggtggacggccacgagctt
cacgaggaggacctgaggctgatgtacaccttcaaccagagctcagactcagctgcacag
tatgaagcacactctgacgcacaggtcctggtgctgttggatgtcaccccggaccagtcc
atggtggacgaaggcgttgcccgtgaggtcatcaaccgcattcagaaactacgcaagaag
ggccatttggtaccatcagatgagataactgtgtactaccgctgccagccagagggggag
tacttggactctgtgatccaggctcacaccgacttcatcctggccacgaccaaggctcca
cttctgcccttccctgtccccaaaactgccagtgtcatcatagaggaaaaaacacagctg
aagggctcagacttggagttaaccattgtgaagggatcgtcagcccctcgggctcctctc
agtggaccagcttgcacctatgtgaacctcagggtgaaggtcaacaacaaagagcaagag
ggggtggtgctgttggagaaccccaaaggagataacagactagacgtggacaagctgagg
aaagtgtgcagcagcatctttggaacaaacaacacccagctcagattcttcaacaggcgg
ggctggtga
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