Lates calcarifer (barramundi perch): 108891804
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Entry
108891804 CDS
T04895
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04140
Autophagy - animal
lcf04217
Necroptosis
lcf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108891804
04137 Mitophagy - animal
108891804
09143 Cell growth and death
04217 Necroptosis
108891804
04218 Cellular senescence
108891804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891804
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108891804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108891804
Membrane trafficking [BR:
lcf04131
]
Autophagy
Mitophagy
Cargo receptors
108891804
Pexophagy
108891804
Aggrephagy
108891804
Xenophagy
108891804
ER-phagy
ER-phagy recepters
108891804
Other autophagy associated proteins
Midbophagy
108891804
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108891804
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108891804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
DUF7307
Motif
Other DBs
NCBI-GeneID:
108891804
NCBI-ProteinID:
XP_018544643
UniProt:
A0AAJ7Q234
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSVTVKAYLLGKDESVKEIRRFAVDQDVSCSFEYLSRKTAGVFSNLKNNGFNMYYRDEDG
DLVAFSSDDELMMGLACVKDGTFRLFIKEKKEHRRDFPLHAFPPFTFAPPPPPGGPQHAP
PPHMAPPPVLHPNVTCDGCDAPVVGTRFKCSVCPNYDLCSTCQARGTHTEHALLPIWHPL
QQWFPRGKWMKRIRHCMWNQNLNQGQPPNQDQDQTQDQDQAQAQAQDGDQAGSSRPATGS
ASQANVDFLKNIGEGVAAMLSPLGIDVDIDVEHEGQRTKVTPPSQSGGAEGNVEMEMDGG
GSEGSKMSRDSDEEWTHLSSREVDPSTGELQSLQPRNQDQEQDSPSGDQQGPSGLREAAL
YPHLPQEADPRLVESLSLMLSMGFTDEGGWLTRLLQAKNFDIGAALDAIQYAKQPRPHQP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacggtgaaggcctacctactgggaaaggacgagtcggtgaaggagattcgg
agattcgcggtggatcaggacgtttcctgcagcttcgaatacctgagcaggaaaaccgcc
ggagtctttagtaacctgaagaacaacgggtttaacatgtactacagagatgaagatgga
gacctggtggcgttttcttctgatgatgaactgatgatgggtttggcctgtgtgaaggac
ggcaccttccgtcttttcatcaaagagaagaaggagcaccgtcgggacttccctctccat
gccttccctcccttcaccttcgcccccccccctccacccggaggtcctcagcacgccccg
cccccccacatggccccgccccccgtcctccaccctaacgtcacctgtgacggctgcgac
gcccccgtggttgggactcgcttcaagtgttcagtttgtccaaactatgacctgtgctcc
acctgccaggccagagggacacacactgagcacgctctgctgcccatctggcaccccctg
cagcagtggtttcctcgggggaagtggatgaagaggataagacactgcatgtggaaccag
aacctgaaccaaggtcagcctcccaaccaggaccaggaccagactcaggaccaggaccag
gcccaggcccaggcccaggacggggaccaggctggatcctccagacctgcaactggctct
gcctctcaggcaaacgtggacttcctgaaaaacatcggggagggcgtagcagccatgttg
agtccgctgggtatcgatgtggacattgacgtggagcacgaaggtcagaggactaaggtg
acccctccctctcagagcgggggggcagagggcaacgtggagatggagatggatggagga
ggcagcgaggggtcaaagatgagcagagactcagatgaggagtggactcacctgagctct
agagaggtcgacccctccaccggagaactgcagtcgctccagcccaggaaccaggatcag
gagcaggactccccgtcaggagaccagcagggtccatcaggtctgagggaggcggctctg
tacccccacctgcctcaagaggcagacccacgcctggtggagtccctgtccctcatgttg
tccatgggtttcaccgatgagggggggtggctgactcgactccttcaggccaaaaacttt
gacattggtgccgcgcttgacgccatccagtacgccaaacagccccgcccacaccagccc
tga
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