Lates calcarifer (barramundi perch): 108893138
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Entry
108893138 CDS
T04895
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108893138
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M10
108893138
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
108893138
NCBI-ProteinID:
XP_018546497
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Position
LG20:6508522..6512441
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AA seq
474 aa
AA seq
DB search
MNIFNLSILLSLAVAVYCVPVSEVTVQDENFAESYLKKFFNLTDETGPTVRRGISPVSRK
LAEMQRFFGLKITGALDAETMAMMKKPRCGVPDTKIADFSTFGNNLKWKKNSLTYRIENY
TPDMSASEVDDSIEKALQVWAKVTPLRFTRLYSGTADIMISFGRGSHGDYYPFDGPDGTL
AHAFAPSPGIGGDAHFDEDENFTFRSNRGYVLFMVAAHEFGHSLGLSHSDDPGALMYPVY
TYRNPDTFILPRDDVRGIQSLYGPNPEIDPQQPKPTAPTTPDACDSTMVLDAVTTLRGEM
FFFKDSFFWRSNPQSSSAQQYLITSFWPSAPTNIDAAYESRQSDRVYLFKNRKVWAFSGY
NAVPGYPKKLTSFGLPRHVRKIDAALYDVQTRKSLFFVGSYYFSYDEARGAMDPGFPKHL
DQTFSGLTNRVTAAFQYRGFTYIYSGPYMFEYDLRTGRLYRVLRNSYFLRCTNF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttcaacctgagcattctactaagcctggcagttgcagtttactgtgtgcca
gtatcagaagttactgtgcaagatgaaaactttgcagagagctacctgaagaaattcttc
aacctcacagatgagaccggtccaactgtcagaagggggatcagcccagtgagcaggaag
ctggctgagatgcagagattctttggcctcaagatcactggggcactggatgctgaaacc
atggccatgatgaagaaaccccgctgtggcgttccagacaccaagattgccgatttctcc
acatttggaaacaacctcaagtggaagaaaaacagccttacctacaggattgagaactac
acacctgacatgtctgcgtcagaggtggacgactccattgagaaagcgctgcaggtttgg
gccaaagtcactcctctgaggttcacaagactctacagtggcaccgctgacatcatgatc
tcatttggtcgtggatcacatggagattattaccccttcgatggtcctgatggcactctt
gctcatgcctttgctccatctcctggtattggaggagacgctcattttgatgaagatgag
aacttcactttccgctccaacagaggctacgtcctcttcatggtagctgcccatgagttt
ggccactctctgggcttgtctcattctgatgatcctggtgctctcatgtaccccgtgtac
acctacagaaaccctgacaccttcattctgccccgggatgatgtcagaggcatccagtct
ctctatggtccaaaccctgaaatagatcctcagcagcctaaacccacagcccccaccacc
cctgatgcttgtgattcaaccatggtcttggatgctgtcaccaccctgcgaggagagatg
ttcttcttcaaggacagcttcttctggcgtagcaaccctcagagcagttcagctcagcag
tatctcatcacaagcttctggcccagcgcccctaccaatattgatgctgcctatgagagc
agacagtcagacagagtctacctctttaaaaaccgcaaagtgtgggccttcagtggctat
aatgcagtaccaggctatcctaaaaaactcaccagttttggtctgccaagacacgtgagg
aaaatcgatgctgccctctatgatgtacagactcgcaaatctctgttctttgtaggcagc
tattacttcagttatgatgaggccagaggggctatggacccaggattccccaaacatctt
gatcagaccttctctggactgaccaacagggtgactgcagctttccaatacagaggtttt
acttacatctacagtggaccctacatgtttgagtacgacctgaggactgggaggttgtac
cgtgtgttgaggaacagctacttcttacgctgcactaacttctag
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