Lates calcarifer (barramundi perch): 108893262
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Entry
108893262 CDS
T04895
Name
(RefSeq) matrix metalloproteinase-18
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108893262
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M10
108893262
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Astacin
Metallopep
Reprolysin_5
DUF4953
Peptidase_M66
Reprolysin_4
Peptidase_M6
Motif
Other DBs
NCBI-GeneID:
108893262
NCBI-ProteinID:
XP_018546658
UniProt:
A0AAJ7Q4T5
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Position
LG20:6494227..6500675
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AA seq
496 aa
AA seq
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MLWLSLLIILLAGHTPVMGLPLRTSDLPTQPHAGPSGADREFAEEYLWRFYGYQPKLARQ
KRTTDKDEDADWKTGLCDKLQSMQRFFGLHPSGELDKETLAVMKRPRCGLSDVEQFGGTI
RWKKRTLSYRITGSNLPSSASKIHKVFREAWKLWSSVVPMKFRKRSRKEADIVICFHKGD
HEDGTPFDGKGGILAHAFLPGSGIGGDVHFDADEDWSFNSTGFNLFAVAAHEFGHALGLP
HSSDPGAIMYPSYNFAPNYELQLSFRDVKDVQNLYGISANFASLFSKKPPPRTPDKCDPD
LSFDAVTELQQEVLFFKDRFMWRKHPQFDETAITLISSLWPDIIPPFLDAVYENVDGNVI
VFFKGHQYWTLRQLKLQEDSPRNISHLGFPSRIKSIDAALHFRIERSTVFFTGHECWRYN
EKQRMMEGSPVLIEQMWPGIPTPIDAAVFYEGFVHFFKGNIHYKYDSNSKRVVSTSPVND
LLECEKHNNEILTERR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggctgagtcttctgattatccttctggctggccacactcctgtgatgggctta
cctctccgaacctcagacctgcctacacagcctcatgctggaccatctggagctgaccgg
gagtttgcagaggaatatctatggcgattctatggctaccagcccaagttagcaagacag
aagaggactacagacaaagatgaagatgctgattggaagactggactgtgtgataagctt
cagagcatgcagcgattctttggtttacatccaagtggagagctggacaaagagaccctg
gcagttatgaagaggccgcgctgtggtctgtcagatgtggaacaatttggaggcacaatt
cgctggaagaagagaaccctcagctataggatcactggttccaacctccccagttcagcc
tcaaagattcacaaagtcttcagggaggcatggaaactctggtccagtgtcgtaccgatg
aaatttcgcaagcggagcaggaaagaggctgacatcgtcatctgcttccacaaaggagac
catgaggacggcacaccttttgatggcaaaggaggaatcctggctcatgcctttctgcct
gggtctggtattggtggagacgtacactttgatgctgatgaggactggagctttaattct
actggtttcaacctgtttgctgtagcagcccatgaatttggccatgcactcggcctgccc
cactcatctgatcctggagccatcatgtacccatcatacaactttgctcccaattatgag
ctgcagctctccttccgtgatgtcaaagacgtccaaaacctgtatggtatcagtgccaat
tttgcgtcactattctcaaaaaagcctcctccaagaacacctgacaaatgtgatccagat
ttgtcctttgatgctgtaacagaattacaacaggaggtcctgttttttaaagacagattt
atgtggcgcaaacatcctcagtttgatgaaacagcaatcactctgatcagcagtctgtgg
ccagacatcatccctcccttcttggatgctgtctatgagaacgtggatgggaatgtaatt
gtatttttcaaaggtcatcagtactggacgctgaggcaactaaaactccaggaagattct
cctagaaacatctcacacttgggcttcccctccagaataaaatctatagatgctgctctt
catttcagaattgagcgctccactgtgttcttcactggccatgagtgttggaggtacaat
gagaagcagaggatgatggagggatcaccggtgctcatagagcagatgtggccagggatt
ccaactcccatagatgcagccgtcttctatgagggatttgtgcacttcttcaaaggaaat
atccactacaaatatgattccaactccaaacgtgtcgtctccaccagccctgttaatgac
ctgctggagtgtgagaagcacaacaacgaaatactgacagaaaggagataa
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