Lates calcarifer (barramundi perch): 108893376
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Entry
108893376 CDS
T04895
Symbol
hsd20b2
Name
(RefSeq) hydroxysteroid (20-beta) dehydrogenase 2
KO
K10251
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:
1.1.1.62
1.1.1.330
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00062
Fatty acid elongation
lcf00140
Steroid hormone biosynthesis
lcf01040
Biosynthesis of unsaturated fatty acids
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
Module
lcf_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108893376 (hsd20b2)
00140 Steroid hormone biosynthesis
108893376 (hsd20b2)
01040 Biosynthesis of unsaturated fatty acids
108893376 (hsd20b2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108893376 (hsd20b2)
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.62 17beta-estradiol 17-dehydrogenase
108893376 (hsd20b2)
1.1.1.330 very-long-chain 3-oxoacyl-CoA reductase
108893376 (hsd20b2)
Lipid biosynthesis proteins [BR:
lcf01004
]
Fatty acid synthase
Component type
108893376 (hsd20b2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
NAD_binding_10
3HCDH_N
DUF2960
ApbA
GDP_Man_Dehyd
DUF4235
Motif
Other DBs
NCBI-GeneID:
108893376
NCBI-ProteinID:
XP_050934647
UniProt:
A0A4W6BU45
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All DBs
Position
LG20:complement(12234313..12237827)
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AA seq
319 aa
AA seq
DB search
MSFTEVLAITGGLTVVFQLLKLAWRCWCGLREFVLSEHWQVDLRTFGQWAVVTGATSGIG
KAYASELARRGLDVVLVSRSADKLQMVAREIEDQYGRKTRTIQVDFTDGHSIYPAIAEAL
QGLEIGILVNNVGMTYSDNFSYFLEVPDAERKITQVINCNMLSVPQMTRLVLPGMIERET
GLIINMSSMVGTSPQPLLSLYSSTKIFVSYFSQCLHAEYKAKGITVQCVAPLMVSTNMTM
NKKVNCFVKSASGFAREALNTVGHSSYTSGCLSHALQTVAISILLPDWLRMSSFLIKKLR
NLAKVTEAKQKQKLREKEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcactgaagtattggccattactgggggacttacagttgttttccagctgctg
aaactggcctggagatgttggtgtggactcagggagtttgttttgtcagaacactggcaa
gtggatttaaggacatttgggcaatgggcagtcgtcactggtgccacatctggcattggt
aaagcttatgccagtgagctggcacgaagaggcctggatgttgtcttggtgagcagatct
gctgataaacttcaaatggtcgccagagaaatagaggatcagtatggacgaaagactcgc
accatccaagtggacttcacagatggccacagtatttaccctgctatagctgaggcactg
caaggcctggagattggaattctggtcaacaatgtaggaatgacctattctgataatttt
tcatatttcctggaagtaccagatgctgaacggaaaatcactcaggttatcaactgtaac
atgctgtctgtccctcagatgaccagactggttcttccaggcatgattgaaagagagacg
gggctgatcatcaatatgtcctccatggtgggtaccagtccacagcctttattgtccctt
tactcctccaccaagatttttgtatcatatttctctcagtgtctgcatgctgagtacaag
gcaaaggggattactgttcagtgtgtggcccccttaatggtgtccaccaacatgacaatg
aacaagaaagtcaactgctttgtgaaaagtgcctcggggttcgcccgtgaagccctgaat
actgtgggtcactccagctacaccagtggctgcctgtcccatgcactccagaccgtggct
atctcaatactcctgccagactggctgcgtatgtcgtcgttcctcatcaagaagctacga
aacctcgcaaaggtgactgaagcaaagcaaaagcagaaactcagagaaaaagaggagtaa
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