Lates calcarifer (barramundi perch): 108893399
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Entry
108893399 CDS
T04895
Symbol
auts2a
Name
(RefSeq) autism susceptibility gene 2 protein isoform X1
KO
K23214
autism susceptibility gene 2 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108893399 (auts2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893399 (auts2a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108893399 (auts2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auts2
Motif
Other DBs
NCBI-GeneID:
108893399
NCBI-ProteinID:
XP_018546909
UniProt:
A0AAJ7Q4Z6
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Position
LG20:complement(7169145..7458290)
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AA seq
1293 aa
AA seq
DB search
MKDMDGPRSSGLRKKRKSRSERDRERRSNGIRNNHVKGSVFRFTSDSEQEGDREPSSSRP
RPPRRKRKESTSAEEDIIDGFSITGFVTLEALEKNMTLKPQECRDNQAGPLHKKKPARMP
NGLSLEPCKNNHHYHQPSDQENNPRLAHTQGKRKKKHLNKKHSMLKPGQNNCKDSDSESV
SGESKPSFRSSSRDRLTDCDTESDQDDKVSDAGSEKFFSTAAVKVPDFGIDVLSTNGSQE
PHGPGLLKVSGLERSQERSQESCRDPQPPASSTPSQPSPPQDLPLSQPQPQPSVPQPLSP
HWTQANGPTKAPASTHPPPRSEALPRPQTPAALPLAQGQEPSPPPPPRPQHQPELLSHPR
PPPTPSLHPHPPSPALPTQHPHQQHPSHAGPHRPPSRCHPRPLSAYNSLNLNGHSSSSRS
STPGTKPHGPPPGPSFHLPHHPPPPAAAATAAASTFPLPLAANQSTPHSFPPALQSSPHP
HHPNMFAPPAALPPPPPLTSSTLPVPGHPAAGSAYSEQDLLRQELNTRFLASQSADRGAS
LGPPPYLRTEFHQHQHQHQHQHQHTHQHTHQHTFTPFPHAIMPTPAPPMVRTPARNFDKY
PTKVDPFYRHSLFHSYPPAMSGLPPVIPPTGPFGSLQGAFQPKTSNPLDVSTRPGAVPHT
FLQKDPRLTDPFRPILRKPGKWCAMHVHTAWQIYHHQQKVKQQMQVDPHKLDFGLKPEFL
SRPPGPGLFGAIHHPSDLARPATLFSAAGPTHPSAGPFSHPPHHPGNFLTPASHLEPFTR
PSSFGGLGSLSSSAFGGLGNPALTANSVFGHKDGPNAQQHFNNSSNSSHQEPWNRLHRTP
PSFPTPPPWLKPGDSERSTSVSSHDRDRDSDKREPLVSKDDKDRDSVEKRHLSHPSPVPV
NPISLLGHSRPPEHHRNHLPPTSGEPQRDKENKAKDRERDHSESWKDNGTDDHKLKDNQH
SDKDTPIIHDGRVSDDKVSNRGTASPYVRQTSLERPNSGLSREVLEKKVELQYEHQKKNS
EVKVKEERKEEQDGATERPSEHPAQAPTTPNLHPPSSMPVPMGMAGVHPINSISSLERTR
VVAPFMGISPIPGADRFPYPAFHWDPMRDPYRGLDIHRRDPLARDLLLRNDPLHRLAAPR
LYEAERSYRDREPHDFNRDHAHPLALEQRREQERAQLEERDRLNMLREDYEHGRLHPTMH
HPALDGHLPHPAQGLMAPGLPGMHFSRVSPSAAAAAATAHQNGILNKTPPTASLSAPPPL
IPTLGARPGSPRRTTPLATDIRDRPAHKDIEAR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatggatggccctcgatctagtggcctacgcaagaagaggaagtcaaggtca
gagagggatcgggagaggagatcaaatgggataaggaacaaccatgttaagggctctgtc
tttcgcttcacctccgactcagagcaggagggtgaccgggagccctcctcatcccgccct
cgacccccacgaagaaaacgaaaggagtctacttctgctgaagaggacatcatcgatggc
ttctctatcactgggtttgtgaccctggaggctctggagaagaacatgacactgaagccc
caggagtgcagagacaaccaggcaggacccctgcacaagaaaaagcctgccaggatgccc
aacggcctgagcctggagccctgcaagaataatcaccactaccaccagccttcagaccag
gagaacaacccgcgcctggcacacacacaaggcaagaggaagaagaaacacctgaataag
aaacactcaatgctgaagccaggacagaacaactgtaaggacagcgacagtgagagtgta
agtggagagtccaagccttccttcaggagcagctccagagacagactgacagattgtgac
accgagagtgaccaagacgacaaggtctccgatgctggctctgagaaatttttcagcaca
gctgcagttaaagttccagattttggcatcgatgtgctctccaccaatggcagccaggag
cctcacggcccaggcctcctcaaggtgtcaggcctagagcgcagtcaagagaggagccag
gagagctgcagggatccccaaccccctgcatccagtacccccagtcagccttcgcccccc
caagacctccccctttcccagccacaaccccagccgtccgtcccccagcccctttccccc
cattggacccaggcgaacggccctacaaaggctccggcctcgacccacccgcccccacgt
tcagaggctctccccaggcctcagacgcccgcagccctgcctctcgcccagggccaagag
ccctcgccacccccccctccccggccccagcaccagcctgaactgctgtctcacccccgg
ccgccaccgacacccagcctgcacccacatccaccatcgcctgccctcccgactcaacac
cctcaccaacagcatcccagtcacgcagggccccaccggcccccgtcgcgctgccacccc
agacccctttctgcctacaacagcctcaacctcaacggtcacagcagcagcagcaggagc
agcaccccaggcaccaagccccacgggcccccccctggtccctcctttcacctcccacac
cacccgccacctcctgcagcggctgcaacagcagcagcctccaccttccccctgcccttg
gcggctaaccagagcaccccccacagcttcccccctgccttgcagtcctcgccacaccca
catcaccccaatatgttcgctcctccagcagccttgcctccaccaccaccactgacatct
agcaccctgccagtacctggacatcctgctgctgggagtgcctactcagaacaagacctt
ctgcgtcaggagctgaacacccgtttcctggcctcccaaagcgccgaccgcggcgcctcg
ctgggccctccgccctacctgcgcaccgagttccaccagcaccagcatcagcaccagcat
cagcaccaacacacccaccagcacacccaccagcacaccttcacgcccttcccccacgcc
atcatgcccaccccagcaccgcctatggtgcgtacccctgccagaaattttgacaaatac
ccaacaaaagttgaccccttctacagacacagtctcttccactcctacccaccagccatg
tctggccttccccccgtcattcctccgacagggcccttcggctcactgcagggcgccttt
cagcccaagacctctaatccactggatgtgtccacaagacctggagccgtcccacacaca
ttcttacagaaggaccccaggttaacagatccatttcggcccattctcaggaaaccaggg
aagtggtgcgccatgcatgtccatactgcctggcagatataccaccaccagcaaaaagtg
aagcagcagatgcaggtcgatcctcacaagctagactttggcctcaagcctgagttcttg
agtcgacctccgggccccggcctctttggcgccatccatcaccccagtgacttggcacgg
ccggccacactcttctccgctgcaggacctacacacccatcagcaggtcccttcagccat
ccgccccaccatcccggaaacttcctcaccccagcatctcacttagaacctttcactcgg
ccttcatcatttggaggactgggatctctcagttcatcagcctttggaggactgggaaat
ccagcactaacggccaactcagtattcggccataaagatggccccaacgcacagcagcac
ttcaacaacagcagtaacagcagccaccaggagccctggaaccgtctgcaccgtacaccg
ccctccttccccacaccaccgccctggctgaaacccggagactctgaaaggagcacctcg
gtcagctcgcatgacagggacagagactctgacaagcgggagccgttggtcagtaaagac
gacaaggacagggactctgtagagaagcgtcacctgagccatccatcaccagtccctgtc
aaccccattagcctccttggccacagccggcctcctgagcaccacaggaaccacttgccc
cccacctctggagaacctcagagggacaaggagaacaaggcaaaagacagggagagggac
cactcagagtcctggaaagacaatggaacggatgaccacaagctcaaagacaaccagcac
agtgacaaggacacacctatcatccacgacggccgagtgtcagacgacaaagtgtccaat
agggggacagcgtcgccctacgtccggcagaccagcctagaacgtccaaacagcggcttg
agcagggaggtcctggagaagaaggtagagctgcagtacgagcaccagaagaagaacagt
gaagtgaaagtgaaggaggagaggaaggaggaacaggatggagctacagagaggccaagt
gagcaccctgcacaggcacccaccacgccaaacctccaccctccctcctcgatgcctgtg
cccatgggcatggctggtgtccatccgatcaacagcatcagcagtctggagagaactcga
gtggtggcgcccttcatgggtatcagccccatcccgggagctgacaggttcccctaccct
gccttccactgggacccaatgagggacccctacaggggcctggacattcacagacgggac
cctttggccagggacctgctgctaaggaatgaccctctgcaccggctggcagcgccgcgc
ctttacgaggccgagcgctcctacagggaccgtgagcctcatgactttaaccgcgaccat
gcccaccctctggccttggagcagaggagggaacaggagcgcgcccagctggaggagcgt
gaccgcctcaacatgctcagagaggactatgagcatggacgcctccaccccacaatgcac
catcctgcccttgacggacatctcccccaccccgcccagggcctcatggcccctggactc
ccgggcatgcacttctccagggtaagcccctcagctgcagcagctgcggccaccgcccat
cagaatggtatcctgaacaaaacaccacccaccgcctctctgagtgcccctcccccactc
atccctacattgggtgcccggcccggctcgcccagacggactactcccctggccacagat
atcagagacaggccggctcacaaagacatcgaggcacggtga
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