Lates calcarifer (barramundi perch): 108894093
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Entry
108894093 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: centrosomal protein of 290 kDa
KO
K16533
centrosomal protein CEP290
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108894093
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108894093
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
108894093
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108894093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
ATG17_like
ATG16
GLE1
Motif
Other DBs
NCBI-GeneID:
108894093
NCBI-ProteinID:
XP_018548167
UniProt:
A0AAJ7VDG0
LinkDB
All DBs
Position
LG10:3491163..3521496
Genome browser
AA seq
2444 aa
AA seq
DB search
MPSALEWDKVTRIDPETLHECEKDQVDEVFSMIALTEDWEVKDKTPESIIQVLRVFQAML
KIKDRELIVSHEFLEDMGVRQAKTEKELLAKVSRLEQERKLSGTGPDTRFLRDEIRQLET
QLEQREKELTHIKKDMGKDKKAIEKLVVRAEEAEDEVKKLKREIKKLKKKNEQLLQDVDF
YRGELEQKEPVSSRDENAETQRKLNLANRQLYQCLEDLQRAEDENLYLKTQNEQMQKSLE
ESVKEMEKMTDEYNKMKIVVQQTDSIMDQLRKERDHAKLQVRELTDKIHSMTEEDDPIMA
AVNAKVEEWKRVLSGKDDEILVYQQMIRDLREKLRSAQMDLDKSNIIALQQVIYELCAAV
QERDNQIKMLSEQVEQYTGEMEKHTTLIEELKTSTKKDRGLPSTVQHRKMEELKSKLEAA
ETRAAEAERAVKLAEAHAEEKDKALIEASNRLSQYESGTYGLEAAIAEIKECKNQIRVRD
REAEAMTKEINQLEMRINDLMDENEDFREKLGLEPKQEVDLTVFRRAKDLRQRQYKAENQ
VLTKEIERLEEERLELKKQIRHIVKERGFPQASLFLEEDVRPSRTVPVKQSSTYTDEEIR
RKNEYLEKELSKKERELGLHKTQFEVKLEELSKVKQDLEAALKDVLQAMRINQGATTSDG
AISIANLERLANAIDVNNMTEQSESALHLKSQIHQLVGRNEELRQELKLAREEATTSFGQ
LAGAKEKVSQLEAELELLRKSGSSGVVLRPLTLPEGLGPSSTEVISSLNEYAVQLLQELK
NKEEQNKKFVGTLEEYKDKFAVISHQQGLLYKEYLSEKAEWQKEKETFAEVKDKLEEQKQ
VDAVKIQEFNELLDTLQKNPEEIRRQLSEAFRKLTVLKVNEKKLTRRYTTLLEQEQHLRK
ENSKLRDESSHMQASITKRIGYLQRYKEMAAYKIAALQKALDDSVPSSDLEKANKQYTEL
TVKYRDMLQRDSRLIQRTTNLEHLESENESLREQISAMNKELEITKEKLNTLQQAWENVS
STGGENGMDKADKAMANNEMVSAARRITTLEMKELNERQRAEHAHKMYEHIRNSLKQVEE
RNVELESKFAELTKMNVEAQRVERELRDELADSISKAVSNADRGRITELEKAEAELRIEV
SKLQEVADVAMMQASALQARQQSKEKEIEALRRQILDYQSQSDEKALIAKLHQHIVALQL
SESAALAKLEATTSHIQQLEAYKLRAEQRLDASERTLFLARQEGRNRSKHLRQTIQSLRR
QFAGALPLPQQEKFSVTMVSLQEDRAKAQEEKRKAEKERRRAEGRAEELELRLRGLEELI
STLKDVKGAQKVTEWHKKMEEARLQELRKGRELVVQKEEIRYLKSLVEEQERTIRSLEED
IVQQNMLQEERQLAWDQREVELERQLDQYEKHQTEVLSSAEKFEEGAGSVPDPSLPLAHQ
LEFALGKIREHVRTILDTQATCRNLDEKLKEKEAALWRAEQNIVSRDKVINELRLRLPAA
ANRERLLADLAKHEEGQSDSQPALKLAHQTIKDLQGRLDKKEDVLKKYQNQLAQARQDQE
EMIKRHQEELRILHQKLDLQTDTSLDRFKKTAMELMKKPSISVATSKHLERLAELEQMVA
EQELSLSSATEKLRLTTAELERQRTAMESQAKKHADEMSKLEEYHAAHMKAVTGDTEDQR
SQMAQMEKEMNYLRTELEAQKEANIRSPSNTMKNLVERLKAQLAQKEKQLKALSKALLEL
RAEMTSAAEQQVIASAAQKEESLNVQMLIDRHTKDLKVRVQELNEELQAAKDSTKAARGR
ENTLKEEVDGLSQDLQRSHKIQKRLQAEKEEKEQEIQELKQQIKRLSSALQNQAEPDGTG
QTIENLQKKIRRLESDLEKRAEMKNVKDDHGKSKEEIVRWEEGKKWQAKMEKVKNSMKEK
EREKESLFKQLSTLKDLYGRLEQEKGALQRKLKARGVTADQVVGVRSSEMENEMEELKKK
NSDLETQIFTIKQRQALPRDEAMETLILRNRYLEERVHTLENQMSKEPPSRPSTSGRGTG
TPTQRDQDLQKENLKLASENLELRFQLEQANKDLPRLKNQVADLREMCSALKKEKAEVKK
KLAQIHGTGHSGKTVPELEKTIGLMKKVVERVQRENETLKKSSAPANQEKVAALEQENKK
LKASYEKLRSQSETELSSKLESKTKGLEKIVMENERLRKEIKREVEAAERLRVIRTSLEM
SNEKLEAELEETKQRLRAALSRPITEGADGKTMKASVVTRMFENKMKELEKELSQKTSSL
SELKKQLKEVNEREERAQTSIRQLEDQVDMLKRFPSTAKTDTGLAKELQAMRLVNAELQR
ENIDLKQRLNEYSERYGETSSKLDYGKLRTLLQAAETEKTKLQTEVKKLKKELENFDPTF
FEEIEDLKYNYNVEVKKNILLEEQLKKVCSQFGVKVEIPSVSIS
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctcttgagtgggataaagtgacgagaattgacccggagaccctccatgaa
tgtgaaaaagaccaagtggacgaggtcttcagcatgatcgctttgacagaagactgggag
gtgaaggataaaactcccgagagcattattcaagtcctcagagtgtttcaggccatgctc
aagattaaagatcgggaacttattgtttctcatgagttccttgaagacatgggtgtacgg
caggctaaaactgaaaaggaacttcttgccaaggtgtcgaggctggagcaagagcgcaag
ctctccggcactgggccagacacccgctttctgagagatgagattcggcagctcgagact
cagctggagcagagggagaaggagttgacccacataaagaaagacatgggcaaggacaag
aaggccattgagaagttggtggttcgagcagaggaggctgaggatgaggtcaagaagctg
aaaagagagataaaaaagcttaagaagaagaacgagcagctcctgcaggatgtggacttc
tatcgtggagagctggaacagaaagagccggtctcatccagagatgagaacgctgagacc
cagaggaagctcaacttggctaaccgccagctctaccagtgcttggaagaccttcagcga
gctgaggatgaaaacttatacctgaagacccagaacgagcagatgcagaagagtctggag
gagtctgtgaaggagatggagaagatgacggatgagtacaacaagatgaaaattgttgta
caacagactgactccattatggatcagctgaggaaagagagggatcatgcaaaactacaa
gtcagagagttaacagataaaatccatagcatgactgaagaggatgacccaattatggct
gcagtcaatgcgaaagtggaggagtggaagagagtgctctctgggaaggatgacgaaatc
ctggtgtaccagcagatgatccgtgatctgagagaaaagctgcgttcagcccaaatggac
ttggacaaaagcaacatcattgccttgcagcaggtcatatatgaactctgtgctgccgtc
caagagagagataatcaaatcaagatgctgagtgagcaggtggagcagtatacaggggaa
atggagaagcatacaactctcattgaggagctaaagacgtccacaaagaaagacagaggc
ctaccatcaaccgtacagcacagaaagatggaggagctgaagtctaagctggaagctgca
gagaccagagcagcggaagcagagcgggcggtaaagcttgcggaagctcatgctgaggaa
aaagacaaagcactcattgaggcttcaaaccgcttgagccaatacgagtctggcacttac
ggcctcgaagctgccattgcagagatcaaagagtgtaaaaatcaaatcagagtgagagat
cgtgaggcagaggccatgaccaaagagatcaaccagcttgagatgagaatcaatgacctc
atggacgaaaacgaagatttcagagaaaaattaggcctggaaccaaagcaggaagtggac
ctgactgtatttaggcgagccaaagatctcagacaacgccagtacaaagcagaaaaccaa
gtcctcaccaaagagattgaacggcttgaagaggaaagactggagctaaagaaacaaatc
agacacatagtgaaggagagaggtttcccacaggcgagcttgtttctggaggaagacgtc
aggcccagcagaaccgtaccagtcaaacaaagcagcacttacacagatgaagagatcaga
cgtaagaatgagtacctagaaaaagaactgagcaaaaaggagagagagctgggacttcac
aagacccaatttgaagtcaaattggaagaactgtcaaaagtgaaacaagacctggaggct
gccctcaaggacgtccttcaagccatgaggattaaccaaggggccactacatctgacggt
gctatcagtattgccaatctagaaaggctggctaatgcaatagacgtcaacaacatgact
gagcagtcagagtcagccctgcacctcaagtcccaaatacatcagcttgtggggagaaat
gaagaactgaggcaggaattgaaattggcccgtgaagaagcaacaaccagctttggccag
cttgccggcgccaaagaaaaggtgagccagctggaagctgaattggagctgctcaggaag
tcaggcagcagtggagttgtcctccgacctctgaccctccctgagggcctggggcccagt
agcactgaggtcatcagttccttgaatgagtacgcagttcaactgcttcaggagctcaaa
aacaaggaggaacaaaacaagaaatttgtgggaacactggaggaatacaaagacaagttt
gctgtcatcagccaccaacagggactcctctataaagagtacctaagtgagaaggcggag
tggcagaaggagaaagagacatttgcagaggtgaaggacaagctggaagagcaaaagcaa
gttgatgctgttaaaatccaagaattcaacgagctgctggacacccttcagaagaaccca
gaggaaatcaggagacagttgagcgaagctttccgcaagttgacggtgctgaaggttaat
gagaagaaactgacgcggcgttacaccaccctgctggagcaggaacagcacctccgcaag
gagaacagcaagctaagggacgagagtagccacatgcaggcctccatcaccaagaggata
ggctacctccagagatacaaggaaatggctgcatataagatagcagcactgcaaaaggcc
ttggatgatagtgtgccttcatcagacctggagaaggctaacaaacagtacacagagctc
acagttaaatacagagacatgctgcagagggacagccgcctcatacagagaaccaccaac
ctagaacatttggagagtgagaatgagtcccttcgggagcaaatctctgccatgaacaaa
gaactggagatcacaaaggagaaactgaatactttacagcaagcatgggagaacgtcagt
tcaactggaggtgaaaatggcatggataaggcagacaaggcgatggccaacaatgagatg
gtatctgctgccagacgaatcaccactttagagatgaaggagctgaatgagaggcagaga
gctgagcatgcccacaaaatgtatgaacacataaggaattccctcaagcaagtggaggag
cgcaacgtagaactggagtccaagtttgcagagctgaccaagatgaatgtagaggctcag
agggtagagcgggagctgagagatgagctggcagacagcatcagcaaagctgtgagcaac
gctgacagaggcaggattacagagttggagaaggctgaggctgagctccgcattgaggtt
tctaagctgcaagaggtggctgatgtggccatgatgcaagcatctgctctgcaggccaga
caacagtccaaggagaaggaaatcgaagctttgaggagacaaatactggactaccagtca
cagtcagatgagaaggccctcattgcaaagctccaccagcatattgtggctctgcagctc
agtgagtcagctgctttggctaagctggaggccaccacctctcacatccaacagctggag
gcctacaagctgcgtgccgaacagcggctggatgctagtgagcgtacgcttttcctcgcc
cgccaggaaggcagaaatcggtccaagcacctgcggcagaccattcagtcactacgtagg
cagtttgctggagcgctgccacttccccagcaggaaaagttctctgtgactatggtgagc
ctccaggaggacagagcaaaagcccaagaagagaagaggaaggcagagaaagagaggagg
agagcagaaggcagggctgaggagctggaactgaggctccgagggctggaggagctcatc
tctacactgaaggacgtgaaaggggcccagaaggtaactgaatggcacaagaagatggaa
gaagctcgcctgcaggagctgaggaaaggcagggaactggtggtccagaaggaggagatc
aggtacttgaagagtcttgtagaggagcaggagcgaaccatccgctcactggaagaggat
attgtgcagcaaaacatgcttcaggaagagcgccagcttgcatgggatcagcgagaggtg
gagctggagcgccaactcgatcagtatgagaagcaccagactgaagttctgagcagtgcg
gagaagtttgaggaaggtgcaggctctgtaccagaccccagtctacctcttgctcatcag
ttagagtttgctttgggtaaaatcagagagcatgtccgcaccatcttggacacacaggcc
acctgcagaaatttggatgagaagttgaaagagaaagaagcagccctgtggagggcagaa
cagaacattgtgtcccgggataaagtgatcaatgagctgcgtcttcggctcccagctgca
gccaacagagaacgcctgctagctgaccttgccaagcatgaagagggccaatcagacagt
cagcctgccctcaagctggctcaccagaccatcaaagacctccagggccgacttgacaaa
aaagaggatgtgctaaagaaataccagaaccagttggctcaagccagacaggatcaagag
gagatgataaaaagacatcaggaggagcttaggatactacatcagaagctggacttgcag
acggacacctccctggaccgcttcaaaaagaccgcaatggaactgatgaagaagccctct
atcagtgttgcaacctccaagcatctagagcgcctggctgagttagagcagatggtggct
gagcaggaactctcactctcctctgccacggagaagctgaggctgaccactgctgaactg
gagcgccagaggaccgccatggaatcacaggctaagaaacacgctgatgagatgtcaaag
ctggaggagtatcatgctgcccacatgaaggctgtgactggtgacactgaggatcagagg
agccagatggcccagatggaaaaggagatgaactacctccgaactgagctggaggcccaa
aaggaggccaacatccgctcccccagtaacaccatgaaaaatctggttgaacgactcaaa
gcacaactcgcccagaaagagaaacagctcaaggctctcagtaaggctctgttggagctg
cgggctgagatgacatctgctgcagaacagcaagtcatagctagtgctgcacagaaagaa
gagagcctcaatgtacagatgttgattgacaggcacactaaagacctaaaggtgcgagtc
caagaacttaatgaagaacttcaagctgcaaaggactctaccaaggcagccagaggtcgg
gagaacaccctgaaagaggaagtggacggcttgagccaggacctccagaggagtcacaaa
attcagaaacgccttcaggctgaaaaggaggagaaggagcaggaaatccaggagctcaag
caacaaatcaagaggctcagcagcgctcttcagaatcaagcagaaccagatgggacgggg
caaaccatcgagaatctacagaagaagatcaggaggctggagtctgacttggagaaaaga
gcagaaatgaagaatgtcaaagatgatcacgggaagagtaaagaagaaattgtgcggtgg
gaggagggtaaaaaatggcaggcaaagatggaaaaggtgaagaattcaatgaaggagaag
gaacgagagaaggagtccctattcaaacagctcagcactcttaaagacctctatggcaga
ctggagcaagagaagggtgcactgcagagaaagctgaaggctcgaggtgtgactgccgat
caggtagtgggagtgagatccagtgagatggagaatgaaatggaggagctgaagaagaag
aactcagacctggagacacagatcttcaccataaaacagcgccaggctttacctcgtgac
gaggccatggagactctgatactgaggaaccgctacctggaggagagagtccacactttg
gagaatcagatgtctaaggagcctccgtcaaggccctctacttcgggacgaggcactggc
actcccacacagagagatcaggacctccaaaaagagaacctcaagctagcctctgagaac
ctggagctgcgctttcagctggagcaggccaacaaagacttaccaagactcaagaatcaa
gttgcagaccttagggagatgtgcagtgcactgaaaaaggaaaaggcagaggtgaagaaa
aagctggctcaaatacatggaactggtcacagtggtaaaacagtacctgaacttgagaaa
accattgggttgatgaagaaggtggtggagagggtgcagagggaaaatgagaccctgaag
aaatccagtgcacctgcaaatcaagagaaggtcgccgctttggagcaagaaaataaaaaa
ctaaaggccagctatgagaaactgaggagccagagtgaaacagagctgagttcaaaactt
gaatccaaaaccaaaggactggagaaaatcgtgatggaaaatgaacgtttacgcaaggaa
atcaaaagggaagtggaggctgcagagaggctgagagtgatcagaacaagtctggagatg
agcaacgagaagctcgaggcagagctggaagaaaccaaacaacggcttcgggcagctctg
tccagacccatcacagagggagcagatggcaagaccatgaaggcatctgtggtgacaaga
atgtttgagaacaagatgaaggaactggagaaggagctctcccagaagacctccagcctc
tctgaactcaaaaaacagctgaaggaggtgaacgagcgtgaggaaagagctcagacaagc
atccggcaacttgaagatcaggttgacatgttaaaaagatttccttccactgcaaagact
gacacaggactcgccaaagagctccaggcaatgagattggtcaacgctgagctacagagg
gagaacatagatctgaagcaaagactcaacgagtacagtgagcgatatggggaaacgtct
tctaaactagattatgggaagctcagaacgcttctgcaggcagccgaaactgagaaaacc
aaacttcaaacggaggtcaaaaagctgaagaaagaactggagaactttgacccaacgttt
tttgaagagattgaggacttgaaatacaactacaatgtagaggtcaagaagaacattctg
ctggaggaacagttgaagaaggtgtgtagtcagtttggtgtaaaagttgaaatacccagt
gtgtccatcagttaa
DBGET
integrated database retrieval system
