KEGG   Lates calcarifer (barramundi perch): 108894512
Entry
108894512         CDS       T04895                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108894512
Cell adhesion molecules [BR:lcf04515]
 Cadherins
  Protocadherins
   108894512
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 108894512
NCBI-ProteinID: XP_018548695
UniProt: A0A4W6DS46
LinkDB
Position
Unknown
AA seq 836 aa
MEFMERAIMWNKLPVWQVFLWWHHFFLLWSTIDGQTRYSIPEEVKQGTVVGNLAKDLGLV
VSELYRRKLRITSEAGKQYFSVDLGKGELVVIDRIDREELCGQRPSCLLPLELVIDNPLQ
LHRVEIEIQDTNDNSPSFLTKERVLKIAELVNPGARFPLESAQDPDVGTNSVRSYLISKN
DNFKLTVKNHKDGRKIPELVLEKPLDREKLSVHNLILTAVDGGDPVRSGTSEITVVVLDN
NDNAPQFERQVYEANVSEKATPGTEILQVKATDADEGLNGEIEYFFAEQTTDLILSLFDI
EPSTGAIVVKGVLDHETNSLHRFDIIAKDKGNPKMDGHCGIEIKIVDINDNIPEIIVTSL
TTPVPEDSPIGTVIALISAKDPDSGDNGKVKLTVSSKYPFRLNPSVSNHYSLVTNGPLDR
EKNGQYSVKISATDAGKPPLSSEKIILVELLDVNDNPPVFSQPSYVVYVKENHPPGRILC
SVSASDSDSGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNSPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYKLAEATDTSLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEP
VQSSTVTVSILLEDGLHEPILDLRQKIAEPSKKNGRITLYLILSLASVSVLSLLTFLILT
VKCIRNSRSSGSCCMRRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKQSFILIMKI
NT seq 2511 nt   +upstreamnt  +downstreamnt
atggaatttatggaacgagcaataatgtggaacaaactgcctgtatggcaggtttttttg
tggtggcatcatttctttctattgtggagtacaatagatgggcagactcgctacagcatc
ccggaggaagtgaaacagggcactgtggtaggaaacctggccaaagatttgggtttggtc
gtatctgaactttaccgacgtaaattgcggataacctcggaagctggtaagcagtatttt
agtgtggacttggggaaaggagaactggtggtgattgataggatagatagggaggaactg
tgtggacaaagaccgtcatgtttattgcctttggaactagttatagataaccccctacag
ctgcatagagtcgaaattgaaatacaggacacaaacgataattcgcctagttttcttact
aaagagagagtgttgaaaattgcagagctggtaaatccaggtgcgcgatttcctttagag
agtgcacaggatcccgatgttggaactaattctgtacgctcttacctcataagcaaaaat
gacaatttcaaactgactgttaaaaaccacaaggacggaagaaaaatccctgaactggtt
ctcgaaaaacctctcgatcgagaaaagctgtctgtacataatctcatcctcactgctgta
gatggtggagatccggtgcgctcagggacatctgaaattacagttgtagtacttgacaac
aacgacaatgcaccacaatttgagagacaggtgtatgaggctaatgtcagcgaaaaggca
acacctggaactgagatactgcaagttaaagctacagatgcagatgagggactaaatgga
gaaattgaatatttttttgcagaacaaactacggatctaattctatcattatttgacatt
gaaccatccactggagctattgttgtcaaaggagttttagaccatgaaacaaactcttta
cacagatttgacataatcgctaaagacaaaggcaaccctaagatggatgggcattgtggc
attgaaattaaaatagttgatatcaacgacaatattcctgaaataattgtgacttcttta
acaacacctgttcctgaagattctccaatcggaacagtcattgcattaataagtgcaaaa
gacccagattcgggtgacaacggtaaggttaagttgaccgtgtcttccaaataccccttc
aggttaaatccgtcggtctctaaccattactcattagtgacgaatgggccacttgaccgt
gaaaaaaatggccagtatagtgtcaaaataagtgctactgatgctgggaaacccccatta
tcgagtgaaaaaataatacttgttgaattactagatgtaaatgacaacccaccagttttc
tcacagccttcttatgtcgtttatgtaaaagagaaccatcctccagggcggattttgtgc
tcggtgtcagcatctgattccgattccggggacaatgctaagatttcctactctatactg
gactctaaagtgcaggacgtttctgtctcatcctatgtttacattaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagattcaggtt
caggcaaaggatcagggctccccatctctcagcagcaacgccactgtccatgtttttatc
ctggaccagaacgacaactcccccgctgttatttacccctcctccgctgccctgggctcc
ctctctcatcagaggatgccccgctccgctaaagcaggtcacctggttactaaggtgacg
gccgtggacgctgactcgggccataacgcctggatctcctacaaactggcggaggccaca
gacacctctctgttcaccgtcaatctgtacacaggggaggtgaggactaaacgcgctgtg
tccgagcaggacgactcctctcagaggctgcttatagagatcaaggacgacggggaaccg
gtccagtcctccaccgtcacggtgtccatcctgctggaggacggtctccatgagcccata
ttagacctccgacagaaaatagccgagcccagcaagaaaaatggcagaatcaccctttat
ttgattctctctctggcctcggtgtccgtgctgtctctgctgacttttctcatcttaacg
gttaaatgcatcaggaacagcagaagcagcggtagttgctgcatgagacggaccgactgt
gatgattacaagaaccccaacagaaacctgcagattcagctcaacactgatggacctata
aagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcaggtcctgt
atgtctccaatgtcagagtacagtgatttcactttgattaaacccagcagcaccactgac
tttaaggaggtgatcagtgtcttggatgcatctttacccgacagcacctggacctttgag
agccagcaggtgagcagaaaacagtcattcatcttgataatgaagatataa

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