Lates calcarifer (barramundi perch): 108894512
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Entry
108894512 CDS
T04895
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108894512
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Protocadherins
108894512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108894512
NCBI-ProteinID:
XP_018548695
UniProt:
A0A4W6DS46
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MEFMERAIMWNKLPVWQVFLWWHHFFLLWSTIDGQTRYSIPEEVKQGTVVGNLAKDLGLV
VSELYRRKLRITSEAGKQYFSVDLGKGELVVIDRIDREELCGQRPSCLLPLELVIDNPLQ
LHRVEIEIQDTNDNSPSFLTKERVLKIAELVNPGARFPLESAQDPDVGTNSVRSYLISKN
DNFKLTVKNHKDGRKIPELVLEKPLDREKLSVHNLILTAVDGGDPVRSGTSEITVVVLDN
NDNAPQFERQVYEANVSEKATPGTEILQVKATDADEGLNGEIEYFFAEQTTDLILSLFDI
EPSTGAIVVKGVLDHETNSLHRFDIIAKDKGNPKMDGHCGIEIKIVDINDNIPEIIVTSL
TTPVPEDSPIGTVIALISAKDPDSGDNGKVKLTVSSKYPFRLNPSVSNHYSLVTNGPLDR
EKNGQYSVKISATDAGKPPLSSEKIILVELLDVNDNPPVFSQPSYVVYVKENHPPGRILC
SVSASDSDSGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNSPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYKLAEATDTSLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEP
VQSSTVTVSILLEDGLHEPILDLRQKIAEPSKKNGRITLYLILSLASVSVLSLLTFLILT
VKCIRNSRSSGSCCMRRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKQSFILIMKI
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatggaacgagcaataatgtggaacaaactgcctgtatggcaggtttttttg
tggtggcatcatttctttctattgtggagtacaatagatgggcagactcgctacagcatc
ccggaggaagtgaaacagggcactgtggtaggaaacctggccaaagatttgggtttggtc
gtatctgaactttaccgacgtaaattgcggataacctcggaagctggtaagcagtatttt
agtgtggacttggggaaaggagaactggtggtgattgataggatagatagggaggaactg
tgtggacaaagaccgtcatgtttattgcctttggaactagttatagataaccccctacag
ctgcatagagtcgaaattgaaatacaggacacaaacgataattcgcctagttttcttact
aaagagagagtgttgaaaattgcagagctggtaaatccaggtgcgcgatttcctttagag
agtgcacaggatcccgatgttggaactaattctgtacgctcttacctcataagcaaaaat
gacaatttcaaactgactgttaaaaaccacaaggacggaagaaaaatccctgaactggtt
ctcgaaaaacctctcgatcgagaaaagctgtctgtacataatctcatcctcactgctgta
gatggtggagatccggtgcgctcagggacatctgaaattacagttgtagtacttgacaac
aacgacaatgcaccacaatttgagagacaggtgtatgaggctaatgtcagcgaaaaggca
acacctggaactgagatactgcaagttaaagctacagatgcagatgagggactaaatgga
gaaattgaatatttttttgcagaacaaactacggatctaattctatcattatttgacatt
gaaccatccactggagctattgttgtcaaaggagttttagaccatgaaacaaactcttta
cacagatttgacataatcgctaaagacaaaggcaaccctaagatggatgggcattgtggc
attgaaattaaaatagttgatatcaacgacaatattcctgaaataattgtgacttcttta
acaacacctgttcctgaagattctccaatcggaacagtcattgcattaataagtgcaaaa
gacccagattcgggtgacaacggtaaggttaagttgaccgtgtcttccaaataccccttc
aggttaaatccgtcggtctctaaccattactcattagtgacgaatgggccacttgaccgt
gaaaaaaatggccagtatagtgtcaaaataagtgctactgatgctgggaaacccccatta
tcgagtgaaaaaataatacttgttgaattactagatgtaaatgacaacccaccagttttc
tcacagccttcttatgtcgtttatgtaaaagagaaccatcctccagggcggattttgtgc
tcggtgtcagcatctgattccgattccggggacaatgctaagatttcctactctatactg
gactctaaagtgcaggacgtttctgtctcatcctatgtttacattaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagattcaggtt
caggcaaaggatcagggctccccatctctcagcagcaacgccactgtccatgtttttatc
ctggaccagaacgacaactcccccgctgttatttacccctcctccgctgccctgggctcc
ctctctcatcagaggatgccccgctccgctaaagcaggtcacctggttactaaggtgacg
gccgtggacgctgactcgggccataacgcctggatctcctacaaactggcggaggccaca
gacacctctctgttcaccgtcaatctgtacacaggggaggtgaggactaaacgcgctgtg
tccgagcaggacgactcctctcagaggctgcttatagagatcaaggacgacggggaaccg
gtccagtcctccaccgtcacggtgtccatcctgctggaggacggtctccatgagcccata
ttagacctccgacagaaaatagccgagcccagcaagaaaaatggcagaatcaccctttat
ttgattctctctctggcctcggtgtccgtgctgtctctgctgacttttctcatcttaacg
gttaaatgcatcaggaacagcagaagcagcggtagttgctgcatgagacggaccgactgt
gatgattacaagaaccccaacagaaacctgcagattcagctcaacactgatggacctata
aagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcaggtcctgt
atgtctccaatgtcagagtacagtgatttcactttgattaaacccagcagcaccactgac
tttaaggaggtgatcagtgtcttggatgcatctttacccgacagcacctggacctttgag
agccagcaggtgagcagaaaacagtcattcatcttgataatgaagatataa
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