Lates calcarifer (barramundi perch): 108894514
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Entry
108894514 CDS
T04895
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108894514
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Protocadherins
108894514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
108894514
NCBI-ProteinID:
XP_018548696
UniProt:
A0AAJ7Q7H7
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All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MTKRMGYRDWRWQALWWHHFFLLWSIIDGQTRYSIPEELKQGSVVGNLAKDLGLGLSDIF
DRTLRVASEAGEQYFSVDVGKGELVVNDRIDREALCGQSPSCVLPLQIVLENPLNLHRIE
VEIKDINDNSPRFHTKEMSLKIAESAAVGARFVLESAEDSDVGSNSVKLYTLTKNDCFTL
KMKEVEDGKTVPELVLEKPLDREKKAVHQLLLTALDGGNPVMSGTSKITITVLDVNDNFP
VFDKNVYKVSLQENTAKDTFVVKITATDADEGPNGEVEFSFGSRTPDSVSSVFEINSLTG
EIRLKGDLDYERATSYKIEITAKDKGVPQMESHCRLQIDVVDVNDNTPEIVLTSQPKPVR
EDSPSGTVVALLNARDADSGNNSKVTLQLPKGSPFTLKPSFSNNYALVTSGPLDRERFSQ
YNIEITATDSGSPPLSSKKTIPVSITDVNDNSPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYKLAEATDTSLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSST
VTVSILLEDGLHEPILDLRQKMAEPSKKNGRITLYLILSLASVSVLSLLTFLILTVKCIR
NSRSSGSCCMRRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTADFKEVISVLDASLPDSTWTFESQQVSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcaggcgctttggtggcatcatttc
tttctcttatggagtataatagacggacagactcgttacagcatcccagaggaactaaaa
cagggctctgtggtaggaaatctagccaaagatctgggcttgggtttatcagacattttt
gaccgtacactgcgggtcgcctctgaggctggtgaacagtatttcagtgtggatgtgggg
aagggcgagctggtggtgaatgacagaatagacagagaggctttatgtggacaaagcccc
agctgtgtgttgcctttgcagatcgttcttgagaatcctctaaatttacatcggattgaa
gtagaaataaaagatataaatgacaattcaccccggtttcatacaaaagaaatgtcgtta
aaaattgctgaatcggcagcagtgggagctcgttttgttttggagagtgcagaagattca
gatgttggaagtaattcggtgaaattgtacaccttgactaaaaacgactgttttactttg
aaaatgaaggaggttgaggatggcaaaacagtccccgagttagtgttagagaagcctctt
gatcgagagaagaaagccgttcatcagctactactgactgcattagacggagggaaccca
gttatgtctggtacctccaagatcacaatcacagtgcttgatgtaaatgacaattttcca
gtttttgataaaaacgtatataaagtttccttacaggagaataccgcaaaggataccttt
gttgtcaaaattacagcaactgatgctgacgagggaccaaacggagaagttgaattttct
tttggctcgcgaacaccagattctgtctcatcagtgtttgagatcaattcattaacagga
gaaatacgtttgaaaggagacttagattatgaaagagctacatcctacaaaattgaaata
acagctaaagataagggggttcctcaaatggagagtcactgtcgtctacagatagatgtt
gtagatgttaatgataacactccagaaattgttctcacgtctcagccaaagccagtacgc
gaagactcaccaagtggcacagtggtggctttgctcaatgcacgtgatgctgactccggt
aataatagcaaagtgacactgcaactacccaaaggttctcctttcactctaaaaccatct
ttttctaataattatgcactagttacaagtggtcctttagacagagagcgtttctctcag
tataacattgagataacagccactgattcaggttctcctcctctgtccagtaagaaaact
atacctgtcagcatcactgatgtgaatgacaactctcctgtattcactcagccctcctat
aatgtatatttaaaagagaatggggtaccaggctctatactgtactctgtatcagcctct
gacctggactttggtgaaaacgccaaaatctcttactctatactggactctaaagtgcag
gacgtttctgtctcatcctatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcaggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcttacaaactggcggaggccacagacacctctctgttc
accgtcaatctgtacacaggggaggtaaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccggtccagtcctccacc
gtcacggtgtccatcctgctggaggacggtctccatgagcccatattagacctccgacag
aaaatggccgagcccagcaagaaaaatggcagaatcaccctttatttgattctctctctg
gcctcggtgtccgtgctgtctctgctgacttttctcatcttaacggttaaatgcatcagg
aacagcagaagcagcggtagttgctgcatgagacggaccgactgtgatgattacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtcaccaatgtca
gagtacagtgatttcactttgattaaacccagcagcaccgctgactttaaggaggtgatc
agtgtcctggatgcatctttacccgacagcacctggacctttgagagccagcaggtgagc
agataa
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