Lates calcarifer (barramundi perch): 108895005
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Entry
108895005 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: phosphatidate phosphatase LPIN2
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00561
Glycerolipid metabolism
lcf00564
Glycerophospholipid metabolism
lcf01100
Metabolic pathways
lcf04150
mTOR signaling pathway
Module
lcf_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
108895005
00564 Glycerophospholipid metabolism
108895005
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108895005
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108895005
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
108895005
Protein phosphatases and associated proteins [BR:
lcf01009
]
HAD phosphatases
Other HAD phosphatases
108895005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
WRNPLPNID
Motif
Other DBs
NCBI-GeneID:
108895005
NCBI-ProteinID:
XP_050922869
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All DBs
Position
LG24:complement(14393407..14404779)
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AA seq
971 aa
AA seq
DB search
MKLTGRLPLEQQGQRRRLKSPWTLADTMNYVGQLAGQVLVTVKELYKGINQATLSGCIDV
IVVRQPDGTFQCSPFHVRFGKLGVLRSREKVIDIEINGEPVELHMKLGDNGEAFFVRETE
QHNEIIPAHLVTSPIPTEEVLFRSREPRCVGSAAETGPPLSPEDAASGNTQLCSNSAGKK
KKRRRKKHKAEPRKEEQTATPAGGELELCELSSDEEHNAHNGRTSSLSMMNNNMDHRQHS
PLTALEWDSYPFSDGDWSPCTTREMSEPMSPKSDSELMVKPAESVLRAESHMQWTWGEFP
ESTRVNKKDKTEPKLLTITPSENTHFRVILSSEAMQVDSGEGERNTDPVCSIVKPEPRTI
KADQCSCESQPPEAPSHHRDITGHKPELPNSVCSSFTSEPCPGNSDLNAKTTCKARWTSS
PPSRRGSGLAASGGSSQAEDSAAVCANTGASSKPTDSPIKRRGVRKRSQHQGPEDIYLDD
LNALEPDVVARYFPKSESEQVPKHWVELGRRSGSQSPQSVGSSAAADSGTECLSDSAGDL
PDVTLSLCGGVGENSEISKEKFMEHIITYNEFAENPAIIDNPNLVVRIANRYYNWTLAAP
LILSMQAFQKNLPKATEEAWVKEKMPKKSGRWWFWRKSSVKQSSSETKLERQESLTSESP
ALHQAPETQHKTAEWSSDDETKELNSAAPALTPIERVQTEVPAPASCHSYKKSLRLSSDQ
IASLKLREGPNDVTFSITTQYQGTCRCEGTIYLWNWDDKVIISDIDGTITKSDVFGQILP
QLGKDWTHQGIAKLYHSVHENGYKFLYCSARAIGMADMTRGYLHWVNDRGTLLPQGPLML
SPSSLFSAFHREIIEKKPEKFKIECLTDIKNLFFPNTHPFYAAFGNRESDVFAYKQVGVP
VCRIFTVNPKGELILEQAKGNKTSYSRLSELVEHVFPLRSSQHNATFSCPEFSSFCYWRQ
PIAEVCFEELL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacagggaggttacctctagagcagcagggccagcggcggcgcctgaagtcc
ccctggactctggcggacaccatgaactacgtggggcagctggctggccaggtgctggtg
acagtaaaggagctgtataaggggatcaatcaggccactctgtcaggctgcatcgacgtg
atcgtggtccgacagcctgatgggacgttccagtgttcccctttccacgttcgcttcgga
aaactgggggtgctgcgctccagggagaaagtaattgacatagaaatcaatggggaacct
gtggagctacacatgaagctcggagacaatggagaggccttttttgtccgggagacagag
cagcacaatgagatcatcccagcccacctggtgacctcgcccattcccacagaagaggtt
ctgttcaggagcagagagcccagatgtgtggggtcagcggcagaaactggtccgccgctg
agtccagaagatgcggcctctgggaacacccagctctgctccaactcagccggcaagaag
aagaagaggcgcaggaagaagcacaaagctgagccacgcaaggaggagcaaacagccaca
cctgcaggcggggagctggagctgtgtgagctcagttcagacgaggagcacaatgcacac
aatggacggacatcttcactctccatgatgaataacaacatggaccacaggcaacattcc
cccctcactgccctcgaatgggacagctaccctttctccgacggagactggtccccctgc
accaccagggagatgtccgagcccatgtcgcccaagagcgactccgagctgatggtgaag
ccggcagagagcgtgctcagagctgagtcgcacatgcagtggacatggggggagtttcca
gaatccaccagggtcaacaaaaaggacaaaacggagccaaagctgttgaccatcactccg
tcagagaacacacatttcagggttatcttgagctcagaagcgatgcaggtggactcgggg
gaaggagagagaaacacagatccagtttgtagtattgttaaaccagagcctcggaccatc
aaagccgatcagtgcagctgtgaatcacagccccctgaagctccgtcacatcatagagac
attacagggcacaaaccggagcttccaaattctgtgtgcagcagttttacctccgagcca
tgtcccggtaactctgacctcaacgcaaaaaccacttgtaaggccaggtggacatcttcg
ccacccagccgcaggggcagcggcttggccgccagtggaggcagcagccaggctgaagac
tcggctgcagtttgtgccaacacaggagcttcctccaaacccacagactcgcccatcaag
aggagaggtgtgaggaagaggagccagcatcagggacctgaagatatttacctggatgat
ctgaatgcactcgagcctgatgttgttgcccggtacttcccgaaaagtgagtctgagcag
gttcctaaacactgggtggagctgggacggcgctctggatcccagtcaccgcagtcagtg
ggcagcagcgcagcagcagacagcggtacagagtgtctgtcggactccgccggtgacctc
cctgacgtcaccctgtcgctgtgcggaggtgttggtgagaactcagagatttctaaagaa
aaattcatggagcacatcatcacctacaacgaatttgcagagaatccagcaatcattgac
aatcccaatttagtggttagaattgcaaacaggtactacaactggacactggcagctccg
ttgatactcagtatgcaggcttttcagaagaacttgccaaaggctacagaggaggcctgg
gtgaaggagaaaatgccaaaaaagtctggacgctggtggttctggagaaagagcagcgtg
aagcagtcatcatcagagaccaagttagagagacaggagtccctgaccagcgagagccct
gcccttcaccaggccccagaaacacagcacaaaacagcggagtggtccagcgacgacgag
accaaagagctgaactctgcagcacctgctctgacacccattgagcgtgtgcagacagaa
gtcccggcaccagcttcttgtcactcctacaagaaatccctccgcctgtcctctgaccag
atagccagtctgaagctaagagaggggcctaatgatgtcaccttcagcataaccacccag
taccaggggacgtgtcgctgcgagggcaccatctacctgtggaactgggacgacaaggtt
ataatctctgacatcgatggcaccattaccaaatcagatgtgtttggtcagattctgcct
cagctgggtaaagactggactcatcaaggaatcgctaagctttaccactcagtgcatgag
aatggttacaagttcctgtactgttctgcccgagcgatcggcatggctgacatgacgcga
ggatatttgcactgggtgaacgacagggggactctgctgcctcaaggacccctcatgctc
tccccgagcagcctcttttctgcctttcacagagagatcatagagaaaaagcctgaaaag
ttcaagattgaatgcctcacagacatcaagaacctgttcttccccaacacacatcccttc
tacgcagcctttggaaacagagaaagtgacgtctttgcctacaagcaagtgggtgtgcct
gtgtgccggatattcacagtgaatcccaaaggggagttaattctcgagcaagccaaaggc
aataaaacatcttacagccggctgagtgagctggtggagcatgtttttcctttgcgaagt
tctcaacacaacgccaccttcagctgcccagagttcagctccttctgctactggagacag
ccgatcgctgaggtgtgttttgaggagctgctttaa
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