Lates calcarifer (barramundi perch): 108895017
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Entry
108895017 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator Myc-A
KO
K04377
Myc proto-oncogene protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04012
ErbB signaling pathway
lcf04110
Cell cycle
lcf04218
Cellular senescence
lcf04310
Wnt signaling pathway
lcf04350
TGF-beta signaling pathway
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108895017
04012 ErbB signaling pathway
108895017
04310 Wnt signaling pathway
108895017
04350 TGF-beta signaling pathway
108895017
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108895017
04218 Cellular senescence
108895017
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108895017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895017
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895017
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Cell cycle controlling factors, Myc
108895017
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
108895017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myc_N
Myc-LZ
HLH
BrxC
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
108895017
NCBI-ProteinID:
XP_050922873
UniProt:
A0AAJ8DLC7
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Position
LG24:14705664..14708340
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AA seq
429 aa
AA seq
DB search
MPLNSSLASKNYDYDYDSLQPYFYFDNEEEDFYPQQLQPPAPSEDIWKKFELLPTPPLSP
SRRPSLSSLFPSTADQLEMVTEFLGDDVVNQSIICDADYSQTFLKSIIIQDCMWSGFSAA
AKLEKVVSERLASLHAARKESAVGDGSAEPTAPASAAAAAAAWRLNSSYLQDLNTSASEC
IDPSVVFPYPIAETPKQSAGTPPTKDLGLDTPPNSGSSSSSCSDSEDEDGDDDDEEEEEE
EIDVVTVEKRQAVKRCDPSPLETRHPSPLVLKRCHVSTHQHNYAAHPSMRHEQPAVKRLK
LESSSSSSGGGGGGGSHGHSRVLKQISSNRKCLSPRTSDTEDYDKRRTHNVLERQRRNEL
KLSFFALRDEIPEVANNEKAAKVVILKKATECIYSMQTDEQRLLSLKEQLRRKSELLKQR
LAQLQGSRA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaattcaagtttagcgagtaaaaactatgactatgactacgactctctccaa
ccctatttctactttgacaacgaggaggaggatttctaccctcagcagcttcagcctccg
gcaccgagcgaagacatctggaagaaatttgaactgctgccgacccctcccctctccccg
agccgccggccgtccctgtcaagcctcttcccctccacggcggatcagctggagatggtg
accgagttcctcggcgacgacgtggtcaaccagagcatcatctgcgacgccgactactcc
cagacctttctcaagtccattatcatccaggactgcatgtggagcggcttctccgccgcc
gccaagctggagaaggtggtctccgagcggctcgcctccctgcacgccgccaggaaggag
tcggcggtgggtgacggcagcgcggagcccaccgctcccgcctccgccgccgctgctgct
gcagcgtggaggctgaacagcagctacctgcaagacctgaacacatccgcttcggagtgc
attgatccatcagtggttttcccgtatcccatcgcagagacgcccaaacagagcgcaggg
acgccgcctactaaggatttgggactggacacgccaccaaacagcggcagcagcagcagc
agttgtagtgactcagaagatgaggatggagatgatgatgatgaggaggaggaagaggag
gagatcgatgttgtcacagtggagaagaggcaggcagtgaaacgctgtgaccccagcccg
ctggagaccaggcatcccagcccgcttgtgctgaagaggtgccacgtctccacccaccag
cacaattatgccgcccatccatccatgaggcacgagcagccggctgtcaagaggctgaag
ctggagagcagcagcagcagcagcggtggaggaggaggtggcggcagccacggccacagc
agggtcctcaaacagatcagcagcaaccgcaagtgtttgagcccccggacgtctgacaca
gaggactatgacaagagaaggactcataacgtactggagcgccagaggaggaacgagctc
aagttgagcttcttcgccctgcgggatgagatcccagaggttgccaacaacgagaaggcg
gccaaagtggtgatcctgaagaaggctacagagtgcatttacagcatgcagacggacgaa
cagagactcctctcactcaaagagcagctgaggaggaaaagtgaacttctaaagcagaga
ctcgcacagctgcagggttctcgtgcttaa
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